Pairwise Alignments

Query, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 276 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  139 bits (349), Expect = 9e-38
 Identities = 87/261 (33%), Positives = 127/261 (48%), Gaps = 12/261 (4%)

Query: 23  GLELLDAQYETQNFSRHSHEGYTVGVIERGAQSFYRTGGNHIAPQDSIILVNADEVHTGH 82
           G+E + A +    +  H H+ + VGV E+G Q F      H +    + L+   ++H G 
Sbjct: 14  GIESVRAHFVGHAYDPHWHDSFLVGVTEQGVQQFNCRRVRHRSTPGQVFLLEPGDIHDGL 73

Query: 83  SAVEGGWAYKAMYPLP---EQFATVAKEIGANTGAPYFPQAVVYDPELASQLRLVFETLE 139
           +  E G+ Y  +Y  P   +Q      E       P F   + +D  LA    L F  + 
Sbjct: 74  APTEEGFTYSTLYLEPAWLDQQLRALYEHAPGDSLPSFADTLCHDERLARATALAFRAVH 133

Query: 140 KSTNRLLRETLIYASLVKLMTRH----GRTAPQADQPLSALRPLLLVKEFLDDFPQADVS 195
               R++R+T +   L+  +TRH     R  P    PL+A R     ++FL    + D+ 
Sbjct: 134 DQDLRIVRQTAM-DDLLACLTRHLHWRRRINPDPRLPLTAQR----ARDFLHANLERDIG 188

Query: 196 LEELAQLAGLSPFHLVRTFQKQFGLPPHAYQIQARLRLAKTLLKQGVSISETAQECGFHD 255
           LE+LAQ  G+  F L R F+  FG+ PHAY IQ RL  A+ LL QG + +E A   GF D
Sbjct: 189 LEDLAQACGIDRFRLTRAFKAAFGIAPHAYLIQLRLARARRLLAQGQTPAEVAVALGFAD 248

Query: 256 QSHLHRHFKKALGITPKQYAR 276
           QSHL R F++A  +TP  Y R
Sbjct: 249 QSHLGRWFRRAYQLTPADYRR 269