Pairwise Alignments

Query, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  198 bits (503), Expect = 1e-55
 Identities = 112/270 (41%), Positives = 156/270 (57%), Gaps = 8/270 (2%)

Query: 9   IKEQAKFQIAEEFGGLELLDAQYETQNFSRHSHEGYTVGVIERGAQSFYRTGGNHIAPQD 68
           ++EQ     A   G +E+L A+Y  Q F+ H HEGY   VIE GAQ F+  G  H+AP  
Sbjct: 5   LREQTHLWQAPALGDVEMLHARYYQQRFAPHVHEGYVFTVIESGAQRFWHRGSEHLAPVG 64

Query: 69  SIILVNADEVHTGHSAVEGGWAYKAMYPLPEQFATVAKEIG-ANTGAPYFPQAVVYDPEL 127
           S++L+N DE+HTG +A E GW Y+  YP  E+   V  E+     G P F  +V++DP L
Sbjct: 65  SMVLINPDELHTGATAHEAGWRYRGFYPEHERVTGVLDELELGRHGMPSFKDSVIHDPAL 124

Query: 128 ASQLRLVFETLEKSTNRLLRETLIYASLVKLMTRHGRTA-PQA--DQPLSALRPLLLVKE 184
           A     + +  E S + L ++T    +++ L+ RHG+ A P A   +PL+  R   L++ 
Sbjct: 125 ALAFSQLHQLSEASASALQQQTAWRQAVLALVQRHGQCAEPSAPGHEPLAVARARELLES 184

Query: 185 FLDDFPQADVSLEELAQLAGLSPFHLVRTFQKQFGLPPHAYQIQARLRLAKTLLKQGVSI 244
            L D P    SLE LA    LSPFH  R F++  GLPPHA+  Q RL  A+ +LK G++ 
Sbjct: 185 QLADPP----SLEALAAAVNLSPFHFARVFRQATGLPPHAWLKQRRLARAREMLKHGLAA 240

Query: 245 SETAQECGFHDQSHLHRHFKKALGITPKQY 274
           S+ A + GF DQSHL R FK+A G+TP  Y
Sbjct: 241 SQVAFDLGFADQSHLSRQFKQAYGVTPGAY 270