Pairwise Alignments

Query, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 61/254 (24%), Positives = 117/254 (46%), Gaps = 9/254 (3%)

Query: 22  GGLELLDAQYETQNFSRHSHEGYTVGVIERGAQSFYRTGG-NHIAPQDSIILVNADEVHT 80
           GG+E ++A + +  +  H H+ Y++G    G QSF+  G   H  P ++++L + DE+H 
Sbjct: 21  GGIERIEAWFGSHGYDPHRHDTYSIGRTLAGVQSFHYKGSLRHGIPGNTLVL-HPDELHD 79

Query: 81  GHSAVEGGWAYKAMYPLPEQFATVAKEIGANTGAPYFPQAVVYDPELASQLRLVFETLEK 140
           G +  + G+ Y+  Y  P   A +   +G     P+    +  DP L        + ++ 
Sbjct: 80  GMAGTDAGFRYRMAYVDP---ALIQNVLGGQP-LPFIAGGLSSDPRLYHASEAFVQAVDH 135

Query: 141 STNRLLRETLIYASLVKLMTRHGRTAPQADQPLSALRPLLLVKEFLDDFPQADVSLEELA 200
           +   L  +  +Y   + L    G+   +      A       + F+ +     ++L+ L 
Sbjct: 136 ALEPLEEQDALYDLAIALRAVGGKPRGRKRLDYQAAER---ARAFIMEHLHVGITLDMLE 192

Query: 201 QLAGLSPFHLVRTFQKQFGLPPHAYQIQARLRLAKTLLKQGVSISETAQECGFHDQSHLH 260
           Q +G   + L R F+  +G  P+ +    RL   + ++  G ++ + A   GFHDQSH+ 
Sbjct: 193 QASGRERWSLSRDFRTLYGTSPYRFVTLRRLDCLRRMILDGFTLVDAALAAGFHDQSHMT 252

Query: 261 RHFKKALGITPKQY 274
           RHF +  G+ P ++
Sbjct: 253 RHFTRCYGVPPLRW 266