Pairwise Alignments

Query, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 247 a.a., AraC-type DNA-binding domain-containing proteins from Enterobacter asburiae PDN3

 Score = 81.6 bits (200), Expect = 1e-20
 Identities = 76/255 (29%), Positives = 108/255 (42%), Gaps = 34/255 (13%)

Query: 23  GLELLDAQYETQNFSRHSHEGYTVGVIERGAQSFYRTGGNHIAPQDSIILVNADEVHTGH 82
           GLEL      TQ + RHSH   ++G I  G          +I     +I++ A   H+ +
Sbjct: 16  GLELRSTWQSTQAYKRHSHPQLSIGAIVGGQTCCVCFDREYILNPGDLIVIPACAPHSCN 75

Query: 83  SAVEGGWAYKAMYPLPEQFATVAKEIGANTGAPYFPQAVVYDPELASQLRLVFETLEKST 142
                  +Y  +Y               +T  P   Q V+  P L +    V ETL    
Sbjct: 76  PVAGQPRSYHMLY--------------IDTELPLALQ-VIRSPTLFAHYLDVVETLSP-- 118

Query: 143 NRLLRETLIYASLVKLMTRHGRTAPQADQPLSALRPLL--LVKEFLDDFPQADVSLEELA 200
                     ASL  L++   R A  AD    ALR     + + FL D      SL+ELA
Sbjct: 119 ----------ASLETLLSALPRAADNAD----ALRGTSQQIQQAFLSDLTSPP-SLDELA 163

Query: 201 QLAGLSPFHLVRTFQKQFGLPPHAYQIQARLRLAKTLLKQGVSISETAQECGFHDQSHLH 260
           Q   L    L+RTF++  GL P ++   +R+  AK  L+ G  I++   + GF DQSH H
Sbjct: 164 QRFSLRKETLIRTFRQDTGLTPGSFLNISRVEYAKARLRAGDDIADVGYQSGFADQSHFH 223

Query: 261 RHFKKALGITPKQYA 275
           + F      TP+QYA
Sbjct: 224 KTFVSYTAATPRQYA 238