Pairwise Alignments

Query, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., AraC-type DNA-binding domain-containing proteins from Enterobacter asburiae PDN3

 Score =  140 bits (354), Expect = 2e-38
 Identities = 87/269 (32%), Positives = 132/269 (49%), Gaps = 13/269 (4%)

Query: 10  KEQAKFQIAEEFGGLELLDAQYETQNFSRHSHEGYTVGVIERGAQSFYRTGGNHIAPQDS 69
           ++ A+F+   +  GLEL  A      F  H+HE + +G IE GA+ F   G  H+A + S
Sbjct: 12  RDSARFRHLAQLPGLELYHAHISDYAFEPHTHEAFGIGTIETGAERFRYRGTQHLAAEKS 71

Query: 70  IILVNADEVHTGHSAVEGGWAYKAMYPLPEQFATVAKEIGANTGAP--YFPQAVVYDPEL 127
           ++ +N DE+HTG SA EGGW Y+ +Y  P+    V       TG    +F     +DP  
Sbjct: 72  VVTMNPDEIHTGESATEGGWRYRMVYIEPDLLEEV-------TGLRHWWFSDVTRHDPLR 124

Query: 128 ASQLRLVFETLEKSTNRLLRETLIYASLVKLMTRHGRTAPQADQPLSALRPLLLVKEFLD 187
           + Q+  +   L  + + L ++ L+   L++        AP   +          V+E+L 
Sbjct: 125 SQQIGRLIYGLWHTDDPLAQKGLL-LDLIETFRPLAHHAPVIQEGAHRFE---RVREYLH 180

Query: 188 DFPQADVSLEELAQLAGLSPFHLVRTFQKQFGLPPHAYQIQARLRLAKTLLKQGVSISET 247
           D     ++L+ELA +  LSP+H  R F+  F + PH   +  RL  AK  L  G+  +E 
Sbjct: 181 DNYMRALTLDELASVVSLSPYHFQRQFKAHFHVTPHQMLMAIRLWRAKAFLTHGMPAAEV 240

Query: 248 AQECGFHDQSHLHRHFKKALGITPKQYAR 276
           A   G  DQSHL R F    GITP +Y +
Sbjct: 241 AAATGLTDQSHLTRAFTHRYGITPVRYQK 269