Pairwise Alignments

Query, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., AraC-type DNA-binding domain-containing proteins from Enterobacter asburiae PDN3

 Score =  122 bits (307), Expect = 7e-33
 Identities = 79/259 (30%), Positives = 126/259 (48%), Gaps = 8/259 (3%)

Query: 23  GLELLDAQYETQNFSRHSHEGYTVGVIERGAQSFYRTGGNHIAPQDSIILVNADEVHTGH 82
           G+E + A +E   F  H H+ Y VG+   G Q F+     H +      L+   E+H G 
Sbjct: 15  GIETIKAHFEGHAFDPHWHDSYLVGITLSGTQQFHCRRERHRSQPGDAFLLEPGEIHDGD 74

Query: 83  SAVEGGWAYKAMYPLPEQFATVAKEIGANTGAP-----YFPQAVVYDPELASQLRLVFET 137
           + VEGG+ Y   Y L E++ T A + G     P     +F Q +  +P+L   +   F T
Sbjct: 75  APVEGGFTYLTFY-LDERWLTHALQ-GLYESTPGSYSLHFAQTLTREPQLVRAIGETFST 132

Query: 138 LEKSTNRLLRETLIYASLVKLMTRHGRTAPQADQPLSALRPLLLVKEFLDDFPQADVSLE 197
           L     ++++++ +  +L+  +T H     +    L +       +++L      +V L 
Sbjct: 133 LHNDEMKIVQQSTM-DNLLSRITAHCHWRKKLPSQLQSAAVAHRARDYLYAHIGENVGLS 191

Query: 198 ELAQLAGLSPFHLVRTFQKQFGLPPHAYQIQARLRLAKTLLKQGVSISETAQECGFHDQS 257
           +LA+  G   F L R F+++F L PHA+ IQ RL  A+ LL +G    + A   GF DQS
Sbjct: 192 DLARETGTDRFTLTRCFKREFNLAPHAWLIQLRLAKARQLLARGDQPVDVAAAVGFADQS 251

Query: 258 HLHRHFKKALGITPKQYAR 276
           HL R F++A  I+P  Y R
Sbjct: 252 HLGRWFQRAYRISPAHYRR 270