Pairwise Alignments

Query, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

 Score =  133 bits (335), Expect = 4e-36
 Identities = 81/252 (32%), Positives = 134/252 (53%), Gaps = 7/252 (2%)

Query: 23  GLELLDAQYETQNFSRHSHEGYTVGVIERGAQSFYRTGGNHIAPQDSIILVNADEVHTGH 82
           G+E +DA++    ++ H H+ Y +GV   G Q+F   G +H +   ++I+++ DE+H G 
Sbjct: 48  GIERIDARFHGNAYAPHRHDTYALGVTLSGVQTFSYRGTSHFSMPGNVIVLHPDEIHDGG 107

Query: 83  SAVEGGWAYKAMYPLPEQFATVAKEIGANTGAPYFPQAVVYDPELASQLRLVFETLEKST 142
           +  + G  Y+ +Y  PE+      E G NT  P+   AV+ D E    L      L+   
Sbjct: 108 AGTDEGLHYRMLYLPPEK----TTEAGYNT-LPFARSAVIEDEEFRQCLTEALGNLDGEP 162

Query: 143 NRLLRETLIYASLVKLMTRHGRTAPQADQPLSALRPLLLVKEFLDDFPQADVSLEELAQL 202
           + LL  T   + L  L+ +H   + ++ + +     +LL +++L +     V  +EL Q+
Sbjct: 163 DSLLL-TDWQSRLSDLLWKHSNGSARSIKWIDRAA-VLLCRDYLLENSADTVVSQELEQI 220

Query: 203 AGLSPFHLVRTFQKQFGLPPHAYQIQARLRLAKTLLKQGVSISETAQECGFHDQSHLHRH 262
           +GL  F L R F+  FG  PH Y I  RL+  K +++ G S++ETA  CGF DQ+H  RH
Sbjct: 221 SGLDRFTLFRHFRCVFGTSPHRYLIMRRLQKCKDMMRAGASLAETAFACGFADQAHFTRH 280

Query: 263 FKKALGITPKQY 274
           FK A G+ P ++
Sbjct: 281 FKNAFGMPPGRW 292