Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 618 a.a., Efflux ABC transporter, permease/ATP-binding protein Atu2242 from Variovorax sp. SCN45

 Score =  678 bits (1750), Expect = 0.0
 Identities = 345/619 (55%), Positives = 451/619 (72%), Gaps = 4/619 (0%)

Query: 1   MFKLFEGFTDPFPKGEPQRPPNTLWAFCRHYTRGFEKPLIVMALLSTAIAIIEVSLFGFM 60
           +F+ FE    P+P  EP  PP   +AF    T G    +  MA+L+  ++I E +LF  +
Sbjct: 1   LFRFFEKLLHPYPAAEPSLPPQGFFAFLWACTHGVRGKIAAMAVLTAVMSIFEAALFAIL 60

Query: 61  GQLVDWLSTSSPDTFLTENQSTLIGLGLLVLVGMPLLIAFYSLLIHQSLLGNYPMSIRWL 120
           G++VDWL    P     +  +TL+ L   +++ + + +A  +++ HQ+L  N PM +RW 
Sbjct: 61  GRIVDWLGGQVPSRLWEDRGTTLMWLAAFLVISIGV-VALQTIVKHQTLAVNLPMRLRWN 119

Query: 121 AHRYLLKQSVSFYQDEFAGRISTKVMQTALAVRETVMKSLDVFVYVMVYFTAIVVILAQA 180
            HR +L QS++FYQDEFAGRI+ KVMQTALAVRET+    DV V + VY   +++++   
Sbjct: 120 FHRLMLGQSMAFYQDEFAGRITAKVMQTALAVRETIFVLADVLVAMGVYVATMIILVGVL 179

Query: 181 DWRLMIPMLIWLAIYVTVQMYYVPKLKKVASEQADARSLMSGRIVDSYTNIMTVKLFSHS 240
           D +L+ P LIWL +YV   +Y+VP+L KV   QADAR+LM+GR+ D+YTNI TVKLFSH+
Sbjct: 180 DAQLVWPFLIWLVLYVVSLIYFVPRLGKVGKAQADARALMTGRVTDAYTNIATVKLFSHT 239

Query: 241 QRETQYAEEGMQDFLGTVHRQMRLVTGFNIWVEMANYLLVFTIAALSIYLWITSAISVGA 300
           QRE  +A + M++F+ T + QMRLV+ F I     +  L   +A ++++LW   A+ VGA
Sbjct: 240 QREAGFARDAMREFMHTGYGQMRLVSAFEIVNHTLSMGLTAGMAGMALWLWSNGAVGVGA 299

Query: 301 IAVAVSLSLRINGMSKWIMWEVSALFENIGTVVDGMTMLGKPITVTDKPDAKPLVVKHGG 360
           +A A +++LR+ GMS WIMWE+++LFENIGTV DGM  L +P TV D  DA  L V  G 
Sbjct: 300 VAAATAMALRLQGMSHWIMWEMTSLFENIGTVQDGMKTLSRPRTVLDAADATVLQVPQGE 359

Query: 361 ITFDDVSFHYGEN-KGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESGRIL 419
           + F+  SF YG+  + VI+ LNL +KPGEK+GLVGRSGAGKSTLVNLLLRFHD+ESGRIL
Sbjct: 360 VRFEHASFRYGDGGRRVIDDLNLTVKPGEKIGLVGRSGAGKSTLVNLLLRFHDLESGRIL 419

Query: 420 IDGQPISEVTQESLRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAHAHEF 479
           IDGQ I+ VTQ+SLRS IGMVTQDTSL+HRS+ DN+ YG P+AT EQ+  A  +A AH+F
Sbjct: 420 IDGQDIAHVTQDSLRSHIGMVTQDTSLMHRSVADNVAYGRPDATREQIEAAARRAEAHDF 479

Query: 480 ILGLTDPHGNSGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSEVEA 539
           I  L D  G  GY+A VGERGVKLSGGQRQR+AI+RV+LKDAP+L+LDEATSALDSEVEA
Sbjct: 480 IQTLGDAGGRRGYEAHVGERGVKLSGGQRQRVAIARVMLKDAPILLLDEATSALDSEVEA 539

Query: 540 AIQESLNELMQGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIYAHLWA 599
           AIQ+SL  LM+GKTVIAIAHRLSTIAAMDRLIVLD+G++VE+G H+ L+AQ G+YA LWA
Sbjct: 540 AIQQSLYTLMEGKTVIAIAHRLSTIAAMDRLIVLDEGRVVEEGDHRTLMAQGGLYARLWA 599

Query: 600 HQTGGFI--GCDEDEVEEA 616
           HQ+GGF+  G DEDE   A
Sbjct: 600 HQSGGFLGEGLDEDEALRA 618