Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., Efflux ABC transporter, permease/ATP-binding protein Reut_A2584 from Variovorax sp. SCN45

 Score =  254 bits (649), Expect = 8e-72
 Identities = 200/611 (32%), Positives = 313/611 (51%), Gaps = 54/611 (8%)

Query: 16  EPQRPPNTLWAFCR--HYTRGFEKPLI---VMALLSTAIAIIEVSL-FGFMGQ-LVDWLS 68
           E Q PP+T W   R   + + + K LI   V+ L+STA  ++   L    M   L+ + +
Sbjct: 57  ERQSPPST-WVLLRLGRFAKPYRKQLILGFVLTLISTAATLVPPYLTIPLMDDILIPFQN 115

Query: 69  TSSPDTFLTENQSTLIGLGLLVLVGMPLLIA-FYSLLIHQSLLGNYPMSIRWLAHRYLLK 127
               DT        L GL +  LVG  L  A  Y L +    +G     +R   + +LL 
Sbjct: 116 GQKIDTMRVGLY--LGGLLVAALVGWGLGWARTYLLALVSERIG---ADLRTTTYEHLLT 170

Query: 128 QSVSFYQDEFAGRISTKVMQTALAVRETVMKSLDVFVY----VMVYFTAIVVI----LAQ 179
             + ++  +  G +  ++       R  V  SL    +    +M+  TA+++I    L  
Sbjct: 171 LPLDYFGGKRTGDLMARIGSET--DRINVFLSLHALDFANDVLMIVMTAVILISINPLLA 228

Query: 180 ADWRLMIPMLIWLAIYVTVQMYY-VPKLKKVASEQADARSLMSGRIVDSYTNIMTVKLFS 238
               + +P + W+   V  ++     K+ +V SE  +        + D+   I  VK F+
Sbjct: 229 VVTLVPLPFIAWMIHVVRDRLRTGFEKIDRVWSEVTNV-------LADTIPGIRVVKAFA 281

Query: 239 HSQRETQYAEEGMQDFLGTVHRQMRLVTGFNIWVEMANYLLVFTIAALSIYLWITSAISV 298
             +RE +         L    +  R  + F   V +   + +  + A  I+     +I+V
Sbjct: 282 QERREAERFRVANAYNLQVNDKLNRTWSLFTPTVSLLTEIGLLVVWAFGIWQVARGSITV 341

Query: 299 GAIAVAVS----LSLRINGMSKWIM--WEVSALFENIGTVVDGMTMLGKPITVTDKPDAK 352
           G +   ++       R++ MS+ +    + +A  + I  ++D ++ + +P        A 
Sbjct: 342 GVLTAFIAYIGRFYTRLDSMSRIVSVTQKAAAGAKRIFDILDHVSNVPEP--------AN 393

Query: 353 PLVVKH--GGITFDDVSFHYGENKGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRF 410
           P+ V+   G I    + F YG ++ VI+ L+L I+PGE +GLVG SG+GKSTLVNL+ RF
Sbjct: 394 PVKVERVQGRIEMSGLGFRYG-SRAVIHDLDLVIEPGEMIGLVGHSGSGKSTLVNLICRF 452

Query: 411 HDVESGRILIDGQPISEVTQESLRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKA 470
           +DV  G I +DG  I        R  +G+V Q+  L   +I  NI YG P+AT E+++ A
Sbjct: 453 YDVTDGAIKVDGTDIRRFAVADYRRHVGLVLQEPFLFFGTIAQNIAYGKPDATREEIVAA 512

Query: 471 TAQAHAHEFILGLTDPHGNSGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEAT 530
              AHAH+FIL L       GYD+ VGERG  LSGG+RQRI+I+R LL D  +L+LDEAT
Sbjct: 513 ARAAHAHDFILRL-----QHGYDSLVGERGQGLSGGERQRISIARALLIDPRILILDEAT 567

Query: 531 SALDSEVEAAIQESLNELMQGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQ 590
           SA+D+E E  IQ++L+ L+QG+T IAIAHRLST+   DRL+V+D+G++VE G H  L+A+
Sbjct: 568 SAVDTETEKEIQKALDNLVQGRTTIAIAHRLSTLRKADRLVVMDRGEVVEVGPHDALMAK 627

Query: 591 NGIYAHLWAHQ 601
            G Y  L+  Q
Sbjct: 628 QGAYWRLYQAQ 638