Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 610 a.a., Efflux ABC transporter, permease/ATP-binding protein mlr7818 from Variovorax sp. SCN45

 Score =  262 bits (669), Expect = 4e-74
 Identities = 184/599 (30%), Positives = 288/599 (48%), Gaps = 29/599 (4%)

Query: 17  PQRPPNTLWAFCRH---YTRGFEKPLIVMALLSTAIAIIEVSLFGFMGQLVDWLSTSSPD 73
           P+R   + WA  R    Y   ++  +I          +  V +   +  LVD + T  PD
Sbjct: 19  PERGDRSDWATLRRLFPYLWQYKWRVIAALTFMVGAKVANVGVPVLLKNLVDTM-TPKPD 77

Query: 74  TFLTENQSTLIGLGLLVLVGM----PLLIAFYSLLIHQSLLGNYPMSIRWLAHRYLLKQS 129
                    ++ +GLL+  G+      L      LI           I      +L   S
Sbjct: 78  M---AQALLIVPIGLLLAYGLLRFSTALFGELRELIFAKATEGTARQIALEVFGHLHSLS 134

Query: 130 VSFYQDEFAGRISTKVMQTALAVRETVMKSLDVFVYVMVYFTAIVVILA-QADWRLMIPM 188
           + F+ +   G ++  + +    V   +  SL   V  ++    ++ IL  + D   +   
Sbjct: 135 LRFHLERQTGGMTRDIERGTRGVHSLISMSLYSIVPTIIELVLVLCILGVKFDSLFVWIT 194

Query: 189 LIWLAIYVTVQMYYVPKLKKVASEQADARSLMSGRIVDSYTNIMTVKLFSHSQRETQYAE 248
           L  L +Y+T  +       +      +  S+   R VDS  N  TVK F++ + E +  +
Sbjct: 195 LAALVLYITFTVTVTEWRTQFRKTMNELDSMAQSRAVDSLLNYETVKYFNNEEFEAKRYD 254

Query: 249 EGMQDFLGTVHRQMRLVTGFN------IWVEMANYLLVFTIAALSIYLWITSAISVGAIA 302
             +  +     +  R ++  N      I + +   L   T   +   + +   + V A  
Sbjct: 255 ASLDRYRKAAIKSQRTLSMLNTGQQALIAISLVLMLWRATSGVVDGRMTLGDLVMVNAFM 314

Query: 303 VAVSLSLRINGMSKWIMWEVSALFENIGTVVDGMTMLGKPITVTDKPDAKPLVVKHGGIT 362
           + + + L   G+   I  E+     ++  +     ++ K   V D P+A+PL      + 
Sbjct: 315 IQLYIPLNFLGV---IYREIKQSLTDLDKM---FVLMEKEREVRDAPEAQPLAGTDSTVR 368

Query: 363 FDDVSFHYGENKGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESGRILIDG 422
           F+DVSF Y   + ++ H++  I  G+ V +VG SG+GKSTL  LL RF+DV+ G I I G
Sbjct: 369 FEDVSFAYEPARPILKHVSFEIPAGKTVAVVGPSGSGKSTLARLLYRFYDVQHGHITIGG 428

Query: 423 QPISEVTQESLRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAHAHEFILG 482
           + I +VTQ S+R  IG+V QDT L + ++  NI YG P AT E++  A   A  H+FI  
Sbjct: 429 EDIRDVTQSSVRRAIGIVPQDTVLFNDTVEYNIAYGRPGATREEVEAAARAARIHDFISA 488

Query: 483 LTDPHGNSGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSEVEAAIQ 542
                   GY+  VGERG+KLSGG++QR+AI+R LLK+ P+++ DEATSALDS  E AIQ
Sbjct: 489 TP-----KGYETTVGERGLKLSGGEKQRVAIARTLLKNPPIVIFDEATSALDSANERAIQ 543

Query: 543 ESLNELMQGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIYAHLWAHQ 601
             L    Q KT + IAHRLST+     ++VL+ G IVE+GTH EL+A+ G YA +WA Q
Sbjct: 544 SELKSAAQDKTTLVIAHRLSTVVDAHEILVLESGVIVERGTHAELLAKQGRYAQMWALQ 602