Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 609 a.a., Putative multidrug export ATP-binding/permease protein from Methylophilus sp. DMC18

 Score =  661 bits (1706), Expect = 0.0
 Identities = 333/607 (54%), Positives = 438/607 (72%), Gaps = 1/607 (0%)

Query: 1   MFKLFEGFTDPFPKGEPQRPPNTLWAFCRHYTRGFEKPLIVMALLSTAIAIIEVSLFGFM 60
           +F  FE    PFP     R P   W F    + G  + +++M LL+  I   E  LF  M
Sbjct: 3   LFSRFEALVSPFPAEILTRLPTRFWPFMWACSYGMRRYILIMTLLTACIGSFEALLFALM 62

Query: 61  GQLVDWLSTSSPDTFLTENQSTLIGLGLLVLVGMPLLIAFYSLLIHQSLLGNYPMSIRWL 120
           G++VD L+   P    T +QSTL  L   VLVG  ++I F +LL HQ+L GN+PM +RW 
Sbjct: 63  GKVVDKLTAIQPAQLWTTHQSTL-WLVAAVLVGSTVVILFQTLLKHQTLAGNFPMRLRWQ 121

Query: 121 AHRYLLKQSVSFYQDEFAGRISTKVMQTALAVRETVMKSLDVFVYVMVYFTAIVVILAQA 180
            H+++L QS+ FYQDEFAGR+S KVMQTALAVRE      D+ VYV++YFT IV ++   
Sbjct: 122 FHQHMLNQSMGFYQDEFAGRVSAKVMQTALAVREVWFILADIMVYVLLYFTTIVTVVGSF 181

Query: 181 DWRLMIPMLIWLAIYVTVQMYYVPKLKKVASEQADARSLMSGRIVDSYTNIMTVKLFSHS 240
              +++P L WL++Y    +Y++P+L KV+  QADARSLM+GRI D+YTNI TVKLFSH+
Sbjct: 182 HPWMVLPFLGWLSLYACALVYFIPRLAKVSQHQADARSLMTGRITDAYTNISTVKLFSHA 241

Query: 241 QRETQYAEEGMQDFLGTVHRQMRLVTGFNIWVEMANYLLVFTIAALSIYLWITSAISVGA 300
            RE  YA+  MQ+FL TVH QMR+V+         N  L+    ++ ++LW    ++ GA
Sbjct: 242 GREASYAQSAMQEFLDTVHGQMRMVSCVESINHFLNMCLIIASGSMVLWLWSQGLVAAGA 301

Query: 301 IAVAVSLSLRINGMSKWIMWEVSALFENIGTVVDGMTMLGKPITVTDKPDAKPLVVKHGG 360
           +A  +++SLR+NG+S W+MWE+++L+E IGTV DGM  L     V D+PDA  L V  G 
Sbjct: 302 VAAVLAMSLRLNGISHWVMWELTSLYEQIGTVQDGMNTLSIENRVLDQPDAVALNVPKGE 361

Query: 361 ITFDDVSFHYGENKGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESGRILI 420
           + F+ V F Y +   ++   +L+I PGE+VGLVGRSGAGKS++VNLL+RF+D+++G I I
Sbjct: 362 VVFEKVEFAYDKQPPLLKQFDLHICPGERVGLVGRSGAGKSSIVNLLMRFYDIQAGHIRI 421

Query: 421 DGQPISEVTQESLRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAHAHEFI 480
           DGQ I+ V Q+SLR +IGMVTQDTSLLHRS+R+NILYG P+A++E+++ A  +A AHEFI
Sbjct: 422 DGQSIASVKQDSLRQQIGMVTQDTSLLHRSVRENILYGRPDASDEEMIVAAKRAEAHEFI 481

Query: 481 LGLTDPHGNSGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSEVEAA 540
           L L D  G +GYDA VGERGVKLSGGQRQRIAI+RV+LK+AP+LVLDEATSALDSEVE A
Sbjct: 482 LTLRDAKGRTGYDAHVGERGVKLSGGQRQRIAIARVMLKNAPILVLDEATSALDSEVEVA 541

Query: 541 IQESLNELMQGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIYAHLWAH 600
           IQ  L++LM+GKTVIAIAHRLSTIAAMDRLIVLD+G++VE GTHQ L+AQ+GIYA LW H
Sbjct: 542 IQHHLSQLMEGKTVIAIAHRLSTIAAMDRLIVLDQGRVVETGTHQALLAQDGIYAKLWTH 601

Query: 601 QTGGFIG 607
           Q+GGF+G
Sbjct: 602 QSGGFLG 608