Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 592 a.a., ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  238 bits (608), Expect = 4e-67
 Identities = 151/488 (30%), Positives = 255/488 (52%), Gaps = 11/488 (2%)

Query: 117 IRWLAHRYLLKQSVSFYQDEFAGRISTKVMQTALAVRETVMKSLDVFVYVMVYFTAIVVI 176
           +R     +++K  + F+ +   G + +++M     VR  V   L   V  ++     + +
Sbjct: 110 LRAKVQSHIIKLPIRFFDNAKTGELVSRIMTDVEGVRNLVGTGLAQMVGGVLTSVICLGL 169

Query: 177 LAQADWRLMIPMLIWLAIYVTVQMYYVPKLKKVASEQADARSLMSGRIVDSYTNIMTVKL 236
           L      + + +L+ + I+  + +    K++ +  E+    + ++GR+ ++   I  +K 
Sbjct: 170 LIYISPMMTLYVLVPVIIFGLISLKAFGKIRPIFRERGKINAEVTGRLAETLGGIRVIKG 229

Query: 237 FSHSQRETQYAEEGMQDFLGTVHRQMRLVTGFNIWVEMANYLLVFTIAALSIYLWITSAI 296
           F+   +E +  EEG+      +   +   +       +   L    I  +  Y+ ++  +
Sbjct: 230 FNAEAQEVKTFEEGVLRLYLNIKSSLTTTSMVTSAATLLLGLASAGIMGIGGYMIMSGEL 289

Query: 297 SVGA-IAVAVSLSLRINGMSKW--IMWEVSALFENIGTVVDGMTMLGKPITVTDKPDAKP 353
           + G  +A  + L   I  + +   I  +++  F  +    + M +   P+   +K     
Sbjct: 290 TFGDFLAFTLYLGFMIAPIVQMSNIGSQLTEAFAGLDRTEEIMNI---PLEEDEKSRNLQ 346

Query: 354 LVVKHGGITFDDVSFHYGENKGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDV 413
           L    G + F+ VSF Y E K V+  ++     G    LVG SG+GK+T+  L+  F + 
Sbjct: 347 LPSIKGDLAFEQVSFAYEEGKNVVKEVSFEAPAGSMTALVGTSGSGKTTIAGLVASFLNP 406

Query: 414 ESGRILIDGQPISEVTQESLRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQ 473
             G + IDG  + +V+  S RS++G+V QD  L   +IR NIL+  P+A  EQL++A   
Sbjct: 407 AGGTVTIDGTDLQQVSLASYRSQLGVVLQDDFLFEGTIRQNILFPRPDARTEQLMQAVYA 466

Query: 474 AHAHEFILGLTDPHGNSGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSAL 533
           AH HEF     D     G D  +GERGVKLSGGQ+QRIAI+R +L D  +L+LDEATS L
Sbjct: 467 AHVHEFTDRFED-----GLDTLIGERGVKLSGGQKQRIAIARAILADPRILILDEATSNL 521

Query: 534 DSEVEAAIQESLNELMQGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGI 593
           D+E E  IQESL +LM+G+T   IAHRLSTI   D+++V++KG+IVE+G H+EL+ + G 
Sbjct: 522 DTESETLIQESLKKLMKGRTSFVIAHRLSTIRQADQILVVEKGEIVERGQHEELMEKRGR 581

Query: 594 YAHLWAHQ 601
           Y  L+ +Q
Sbjct: 582 YFELYTYQ 589