Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 595 a.a., Lipid A export ATP-binding/permease protein MsbA from Azospirillum sp. SherDot2

 Score =  257 bits (657), Expect = 9e-73
 Identities = 178/601 (29%), Positives = 298/601 (49%), Gaps = 17/601 (2%)

Query: 15  GEPQRPPNTLWAFCRHYTRGFEKPLIVMALLSTAIAIIEVSLFGFMGQLVDWLSTSSPDT 74
           G+P R             R + +P     L+S  +  +  +  G    L+D     S   
Sbjct: 6   GKPLRLDAATERLAARMWREWVRPYRGKLLMSFVLMAVVAATTGAYPLLID----RSYAM 61

Query: 75  FLTENQSTLIGLGL-LVLVGMPLLIAFYS-LLIHQSLLGNYPMSIRWLAHRYLLKQSVSF 132
           F  +++  L+ + L +V V +   ++ YS  ++   ++      +R     +L    ++ 
Sbjct: 62  FSAQDRGMLLAIPLAIVAVTIIKGVSLYSQTVVTSDIVQRIIADVRLAMFTHLQTADMAQ 121

Query: 133 YQDEFAGRISTKVMQTALAVRETVMKSLDVFVYVMVYFTAIVVILAQADWRLMIPMLIWL 192
                 G ++++ +     +R  + ++L   V  ++   A+V  +   DW L + + I  
Sbjct: 122 LHATPTGSLTSRFINDVDLIRNALTRTLTGLVRDILTVIALVGSMFYLDWLLSLIVFIIY 181

Query: 193 AIYVTVQMYYVPKLKKVASEQADARSLMSGRIVDSYTNIMTVKLFSHSQRETQYAEEGMQ 252
            I     +    +L++V+ +       M+  + +S +    VK ++    E   A     
Sbjct: 182 PIAAVPIVRIGKRLRRVSRDTQAQMGDMTSLLTESLSGARMVKTYNLEDYERARAGRAFH 241

Query: 253 DFLGTVHRQMRLVTGFNIWVEMANYLLVFTIAALSIYLWITSAISVGAIAVAVSLSLRIN 312
           +      + +R  +  +  +E+   + V  + A + Y       SVGA +  V   L   
Sbjct: 242 ENYLLTMKAVRARSRIDPMMEVLGGVAVAGVIAFAGYRMTMGEGSVGAFSGFVGALLMAA 301

Query: 313 GMSKWIMWEVSALFENIGTVVDGMTMLGKPITVTDKPDAKPLVVKHGGITFDDVSFHYGE 372
              + I    +AL E +        +L +  T+ ++P AKPL V  G +    V F Y  
Sbjct: 302 QPVRAIGTLNAALQEGLAAAQRIFELLDQQPTIVEQPGAKPLSVSTGAVALRGVRFSYEA 361

Query: 373 NKGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESGRILIDGQPISEVTQES 432
               +  ++L++  G  V LVGRSGAGKST+ NL+ R +DV  G +LIDGQ +   T  S
Sbjct: 362 GADTLKGIDLDVPAGSTVALVGRSGAGKSTVFNLIPRLYDVTGGEVLIDGQDVRGATLRS 421

Query: 433 LRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAHAHEFILGLTDPHGNSGY 492
           LR  + +V+QDT L + ++R NI +G  +A  + ++ A   A AH+F+  L +     GY
Sbjct: 422 LRGAVSIVSQDTVLFNDTVRANICFGRLDAGMDDVIAAAKAAAAHDFVSKLPE-----GY 476

Query: 493 DAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSEVEAAIQESLNELMQGK 552
           D  +G+RGVKLSGG+RQR+A++R  LKDAP+L+LDEATSALDSE E  +Q +L  L +G+
Sbjct: 477 DTVIGDRGVKLSGGERQRLALARAFLKDAPILLLDEATSALDSESERLVQAALERLTEGR 536

Query: 553 TVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIYAHLWAHQTGGFIGCDEDE 612
           T + IAHRL+T+   DR++V++ G+I+EQG H+ L+A +G YA L   Q G      EDE
Sbjct: 537 TTLVIAHRLATVRNADRIVVMEGGRIIEQGPHEALLAADGAYARLCRLQFG------EDE 590

Query: 613 V 613
           V
Sbjct: 591 V 591