Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 602 a.a., Putative multidrug export ATP-binding/permease protein from Alteromonas macleodii MIT1002

 Score =  252 bits (643), Expect = 4e-71
 Identities = 174/586 (29%), Positives = 309/586 (52%), Gaps = 57/586 (9%)

Query: 41  VMALLSTAIAIIEVSLFGFMGQLVDWLSTSS--PDTFLTENQSTLIGLGLLVLVGMPLLI 98
           V+AL + A+A +       +GQ + +   S    +   T N++T++ L + ++  +    
Sbjct: 32  VIALFTAAVAWL------LLGQGIKYAIDSGFIENAADTLNKATVLVLAITIVACLATYA 85

Query: 99  AFYSLLIHQSLLGN-YPMSIRWLAHRYLLKQSVSFYQDEFAGRISTKVMQTALAVRETVM 157
            FY +    + LG      IR   + +LL    SF+ +   G + ++       ++  V 
Sbjct: 86  RFYLM----TWLGERVSADIRNQVYAHLLSLPPSFFAELRTGEVISRFTSDTTIIQTVVG 141

Query: 158 KSLDVFVYVMVYFTAIVVILAQADWRLMIPMLIWLAIYVTVQMYYVPKLKKVASEQADAR 217
            SL + +  +V F   + ++  +   L   +++ +   +       P++++ A E  D  
Sbjct: 142 MSLSMTLRSVVTFVGALALMTFSSPLLTFCVIVAVPAVLVPIKVLAPQVRRYAKESQDKV 201

Query: 218 SLMSGRIVDSYTNIMTVKLFSHSQRETQYAEEGMQDFLGTVHRQMR---LVTGFNIWVEM 274
           + +  RI +S   IMTV+ ++    E  +  + ++  +    +++    L+ G  + + M
Sbjct: 202 ADLGARIDESLHEIMTVQAYTAENAERLHFSKKVELAMDVAKKRIHYRSLLIGCIMCISM 261

Query: 275 ANYLLVFTIAALSIYLWITSAISVGAIAVAVSLSLRINGMSKWIMWEVSALFENIGTVVD 334
              + +  + A  +   + S ++VG ++  +  ++   G        V+ + E IG V  
Sbjct: 262 TAIIFIAWVGARQV---LDSTMTVGELSAFLFYAVMAGG-------SVATISEVIGEVQR 311

Query: 335 GMTMLGKPITV-TDKPD------------------------AKPLVVKHGG-ITFDDVSF 368
           G+    +   + T KP                         AKP++ K    I  ++VSF
Sbjct: 312 GVGASERLYELFTTKPSIRSLNGDTAEASASSTYSALKGASAKPIISKAAPKIELENVSF 371

Query: 369 HYGENKGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESGRILIDGQPISEV 428
            Y  +K + ++LN+NI+ GE++ LVG SGAGK+TL  LL+RF+D  +G+IL +G PI+++
Sbjct: 372 AYPNSKPLFDNLNINIQAGERLALVGASGAGKTTLFQLLMRFYDPSAGQILFNGAPINKM 431

Query: 429 TQESLRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAHAHEFILGLTDPHG 488
             + LR  I +VTQ+  +   ++ +NI YG+P+A+++ ++ A  QA AHEFI  L +   
Sbjct: 432 PVDVLRQHIAIVTQEPVVFADTVLENIRYGSPHASDDAVINAAKQAFAHEFIDNLDER-- 489

Query: 489 NSGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSEVEAAIQESLNEL 548
              Y+ Q+GERGVKLSGGQ+QRIAI+R +L D P+L+LDEATSALD+  E  +Q++++ L
Sbjct: 490 ---YNTQLGERGVKLSGGQKQRIAIARAILADRPILLLDEATSALDAMSERMVQQAIDRL 546

Query: 549 MQGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIY 594
           M GKT I IAHRL+T+   DR++V+DKGQ+V  G H  L+  + +Y
Sbjct: 547 MVGKTSIVIAHRLATVQHADRILVMDKGQVVGSGDHASLMKSDTLY 592