Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 600 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  282 bits (721), Expect = 3e-80
 Identities = 190/577 (32%), Positives = 307/577 (53%), Gaps = 34/577 (5%)

Query: 39  LIVMALLSTAIAIIEVSLFGFMGQLVDWLSTSSPDTFLTENQSTLIGLGLLVLVGMPLLI 98
           +IV+ + ST   + EV +  F G++VD ++         +N     G G L    + + +
Sbjct: 34  IIVLVVAST---LAEVMVPVFSGRIVDAIAG--------DNGGANAGDGALRAFVIVVAL 82

Query: 99  AFYSLLIHQSLL-GNYPMSIRWLAH------RYLLKQSVSFYQDEFAGRISTKVMQTALA 151
            F S+++   +  G   ++++ +A         + + S  ++ + FAG    K+ +   A
Sbjct: 83  GFTSVVLRWFIFNGIIRLTLKTMADVTNNGFHKVQRFSTDWHANSFAGSTVRKITRGMWA 142

Query: 152 VRETVMKSLDVFVYVMVYFTAIVVILAQADWRLM-----IPMLIWLAIYVTVQMYYVPKL 206
           +       L   +  +V      V+L    W +M     +  LI++ + V + M YV   
Sbjct: 143 LDSLNDLLLVALLPSIVMLVGATVVLGSY-WPVMGLIVGLGSLIYIGVTVGLSMGYVSPA 201

Query: 207 KKVASEQADARSLMSGRIVDSYTNIMTVKLFSHSQRETQYAEEGMQDFLGTVHRQMRLVT 266
            ++A+   D R  + G + D+ +    VK F    RE       +  +     R  +  T
Sbjct: 202 ARLANAW-DTR--LGGALADAISCNAVVKAFGAETREETRLGHVLVKWDNRTRRTWKRGT 258

Query: 267 GFNIWVEMANYLLVFTIAALSIYLWITSAISVGAIAVAVSLSLRINGMSKWIMWEVSALF 326
                       +   I    + +W     + G I   +++   + G  + +  ++  L 
Sbjct: 259 LNGTIQSFMMVSMQAGILGTGLIMWQKGLATAGDITFVLAMFFVLQGYLRDVGQDIRNLQ 318

Query: 327 ENIGTVVDGMTMLGKPITVTDKPDAKPLVVKHGGITFDDVSFHYGENKGVI-NHLNLNIK 385
             +  + + + +   P+ V D+PDAK + +  G I FD V+F YG +   +    ++ IK
Sbjct: 319 RAVNDMEELVLLDKMPLGVEDRPDAKRINIGKGEIVFDHVTFQYGAHATPLYEDFSVTIK 378

Query: 386 PGEKVGLVGRSGAGKSTLVNLLLRFHDVESGRILIDGQPISEVTQESLRSKIGMVTQDTS 445
           PGE+VGLVG SG+GK+T V L+ R +D+++G I IDGQ I++VTQ SLR +I +V Q+  
Sbjct: 379 PGERVGLVGHSGSGKTTFVKLIQRLYDIKAGAIRIDGQNIADVTQASLRGQIAIVQQEPI 438

Query: 446 LLHRSIRDNILYGNPNATEEQLLKATAQAHAHEFILGLTDPHGNSGYDAQVGERGVKLSG 505
           L HR++ +NI YG P+A+  ++ +A  QA AH+FI+ L       GY+  VGERGVKLSG
Sbjct: 439 LFHRTLAENIAYGRPDASRREIEQAAKQASAHDFIMSLP-----KGYETMVGERGVKLSG 493

Query: 506 GQRQRIAISRVLLKDAPLLVLDEATSALDSEVEAAIQESLNELMQGKTVIAIAHRLSTIA 565
           G+RQR+AI+R  L DAP+L+LDEATS+LDSE E  IQ+++  LM G+T + IAHRLST+ 
Sbjct: 494 GERQRVAIARAFLADAPVLILDEATSSLDSESEVQIQQAMERLMDGRTTLVIAHRLSTVR 553

Query: 566 AMDRLIVLDKGQIVEQGTHQELI-AQNGIYAHLWAHQ 601
           A+DRL+V DKG+IVE+G HQ LI   +GIY  L+  Q
Sbjct: 554 ALDRLLVFDKGRIVEEGDHQALIRLHDGIYRRLFERQ 590