Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 587 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  256 bits (654), Expect = 2e-72
 Identities = 154/486 (31%), Positives = 270/486 (55%), Gaps = 23/486 (4%)

Query: 125 LLKQSVSFYQDEFAGRISTKVMQTALAVRETVMKSLDVFVYVMVYFTAIVVILAQADWRL 184
           LLKQ VSF+Q+  +  +  +V   A A R  +   +  FV  +     +++++   ++ L
Sbjct: 110 LLKQGVSFFQNLPSSELLVRVTYNAQAARSVIDTIVTSFVRDLFSLLGLIIVMFAQNFLL 169

Query: 185 M-IPMLIWLAIYVTVQMYYVPKLKKVASEQADARSLMSGRIVDSYTNIMTVKLFSHSQRE 243
             I M+I      +V++  + +++K+   +  +   +   + ++   +  +K FS  +  
Sbjct: 170 SAISMIIGPVAIFSVRLV-LRRVRKIMEAELASLGEIVNVVQETSIGVRVIKAFSLEKLM 228

Query: 244 TQYAEEGMQDFLGTVHRQMRLVTGFNIWVEMANYLLVFTIAALSIYLWITSAISVGAIAV 303
            Q   + + D     +   +L    +  +E  + L +  + A+S Y  +    S G +  
Sbjct: 229 RQRMNKAVSDVEHRANGIAKLEAATSPIMETLSGLAIAVVIAVSGYTVLEKGGSPGDLMA 288

Query: 304 AVSLSLRINGMSKWIMWEVSALFENIGTVVDG--------MTMLGKPITVTDKPDAKPLV 355
            ++  L        + +E +     +   ++G          +L  P+T+ +K DA+PL 
Sbjct: 289 FITALL--------LAYEPAKRLARMRVQIEGGMIGVRMMFEVLDAPLTLAEKKDAQPLP 340

Query: 356 VKHGGITFDDVSFHYGENKGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVES 415
              G +   +VSF Y  N+ V+  +++  + G+   LVG SG+GKST++NL++R +D +S
Sbjct: 341 KASGNVELKNVSFEYVANQPVLKDVSVLFEGGKMTALVGPSGSGKSTIINLMMRLYDPQS 400

Query: 416 GRILIDGQPISEVTQESLRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAH 475
           G + I+G  + +V+  SLR  +  V Q+T L   +++ NI  G  NAT+E+++ A   A+
Sbjct: 401 GSVEINGMDLRDVSFASLREHVSYVGQETFLFSGTVKHNISVGRDNATDEEIIAAAKAAN 460

Query: 476 AHEFILGLTDPHGNSGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDS 535
           AH+FI+ + D     GYD+++GE G  LSGGQRQR+AI+R +L+DA +L+LDEATSALDS
Sbjct: 461 AHDFIMNMPD-----GYDSKLGENGSGLSGGQRQRVAIARAMLRDADILILDEATSALDS 515

Query: 536 EVEAAIQESLNELMQGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIYA 595
           E EA ++++L  L   KT I IAHRLSTI   D+++V+D GQ+VEQG+ +EL+A +G+Y 
Sbjct: 516 ESEALVRDALERLTLNKTSIVIAHRLSTINRADKIVVMDNGQVVEQGSRRELLATDGLYK 575

Query: 596 HLWAHQ 601
            L + Q
Sbjct: 576 RLHSIQ 581