Pairwise Alignments

Query, 619 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 575 a.a., Lipid A export ATP-binding/permease protein MsbA from Acinetobacter radioresistens SK82

 Score =  270 bits (690), Expect = 1e-76
 Identities = 188/541 (34%), Positives = 288/541 (53%), Gaps = 47/541 (8%)

Query: 78  ENQSTLIGLGLLVLV-----GMPLLIA-FYSLLIHQSLLGNYPMSIRWLAHRYLLKQSVS 131
           +NQ  L     LV++     G+ L I  +Y+ +I +SL+      IR      LL+    
Sbjct: 53  QNQQNLNWFPFLVIILIFFRGLGLFIGGYYTAVISRSLI----FQIRQEVFAKLLRLPAQ 108

Query: 132 FYQDEFAGRISTKVMQTALAVRETVMKSLDVFVYVMVYFTAIVVILAQADWRLMIPMLIW 191
           +Y D  +G+I+ K+M     +     +SL   V        ++  L   +WRL I +LI+
Sbjct: 109 YYLDNNSGQITAKIMYNVEQLTAASSESLKTLVQYGFITLGLIGYLLYTNWRLTICILIF 168

Query: 192 LAIYVTVQMYYVPKLKKVASEQADARSLMSGRIVDSYTNIMTVKLFS----HSQRETQYA 247
             +   +      +++K++ +  +    ++  + +S      VK F       +R   ++
Sbjct: 169 APLIGLLIRKAAKRMRKLSVQVQNTMGDINHVVQESVNGNAVVKGFGGETFEQERFYHHS 228

Query: 248 EEGMQDFLGTVHRQ----------MRLVTGFNIWVEMANYLLVFTIAALSIYLWITSAIS 297
            E ++  L  V  Q          M +     IW+ +   +L  T A      +IT+A  
Sbjct: 229 NENLKRGLKMVIVQQMNSPIVQLIMAIAMSIIIWIALRPQVLGNTSAG-EFVAYITAA-- 285

Query: 298 VGAIAVAVSLSLRINGMSKWIMWEVSALFENIGTVVDGMTMLGKPITVTDKPDAKPLVVK 357
            G +A  +     IN   +  M    ++FE +    +  T            D KP++  
Sbjct: 286 -GLLAKPIKSLTDINEKLQRGMAAAYSVFELLDMPEEKNT-----------GDLKPVL-- 331

Query: 358 HGGITFDDVSFHYGENKGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESGR 417
            G I F+ V+  Y +    I   +LN+K GE V LVGRSGAGKS+LVNLL+RF ++ SG+
Sbjct: 332 KGNIEFNQVNLTYSDGSQAIYDFSLNVKAGETVALVGRSGAGKSSLVNLLVRFQEISSGK 391

Query: 418 ILIDGQPISEVTQESLRSKIGMVTQDTSLLHRSIRDNILYGN-PNATEEQLLKATAQAHA 476
           IL+DG  I ++   +LRS+I MV Q   L +RS+RDNI YG    A+E +++ A   A+A
Sbjct: 392 ILLDGFDIQKIELTALRSQIAMVNQQVVLFNRSVRDNIAYGQLQGASEAEIIAAAKAAYA 451

Query: 477 HEFILGLTDPHGNSGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSE 536
           H+FI+ L       GYD  +G +G+ LSGGQRQRIAI+R +LK+AP+L+LDEATSALD+E
Sbjct: 452 HDFIMSLPQ-----GYDTILGAQGLNLSGGQRQRIAIARAILKNAPILILDEATSALDNE 506

Query: 537 VEAAIQESLNELMQGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIYAH 596
            E  IQ++ ++ MQ +T I IAHRLSTI   DR++V+DKG+IVEQG HQEL+ ++G Y  
Sbjct: 507 SEHFIQKAFDKAMQERTTIVIAHRLSTIENADRIVVMDKGRIVEQGNHQELMQKHGAYYQ 566

Query: 597 L 597
           L
Sbjct: 567 L 567