Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  190 bits (482), Expect = 4e-53
 Identities = 114/303 (37%), Positives = 162/303 (53%), Gaps = 9/303 (2%)

Query: 1   MDKFADMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTE 60
           M +F D+ LF        L+AA R + LSPA  +A L+ +E +   +LL RSTR L LT 
Sbjct: 1   MLRFDDLQLFVRAADLGSLSAAARVMDLSPAVASAALKRIEQQLNTRLLARSTRSLRLTA 60

Query: 61  SGVLYHQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPE 120
            G  + +     L+S+ E   LL +G   V G L++SAP D G+  + P L  F   YP+
Sbjct: 61  EGEGFLEYARAALSSLDEGRRLLASGQDHVSGVLQLSAPSDFGRNQLLPWLDEFQRDYPQ 120

Query: 121 VVPYLYLNDNISNLAESGLDVVIRYGELADSSLISRKLATSR-RVLCASPAYLARKGIPK 179
           +   L L D I++L    +D+ +RYGE  DSSLI+  +A    RVLCASP YLAR G P+
Sbjct: 121 LTVRLLLGDRIADLFRQPVDIALRYGEPEDSSLIALPVAPDNVRVLCASPGYLARYGEPR 180

Query: 180 TPQDLAQHDCLAMVRSNEEMKTWHFQENEQHKVITVVPKSFADDGEVIRQWALAGMGIAL 239
               LAQH+CL  +  +     W F + ++   +TV    F+DD +V+R+WA+AG+GIA 
Sbjct: 181 HLGQLAQHNCLLYMLGSRVHDHWTFHDGKREVSLTVTGDRFSDDADVVRRWAVAGVGIAY 240

Query: 240 KSILDVQDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFIDFLIE 299
           KS LDV  D        VL G ++            LN+L   R    K + L  + L+ 
Sbjct: 241 KSWLDVSTD--------VLAGRLRLILPELRGERTPLNLLCAHRAQLSKPVNLLREMLVS 292

Query: 300 QCA 302
           +CA
Sbjct: 293 RCA 295