Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  181 bits (460), Expect = 1e-50
 Identities = 104/302 (34%), Positives = 167/302 (55%), Gaps = 9/302 (2%)

Query: 1   MDKFADMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTE 60
           M    D+ +F        L+AA R L L+PA  +  L+ LE R G++LL RSTR + LTE
Sbjct: 1   MSSILDLEVFVRTADTGSLSAAARGLGLTPAAASIALKRLETRLGIRLLARSTRSMRLTE 60

Query: 61  SGVLYHQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPE 120
            G  Y  +    L+++ E E  L+  S+ + G L+++AP D G+  +   L  F  ++P 
Sbjct: 61  EGRRYLDSVRVALSALSEGEQALKQQSQGLSGLLQLAAPSDFGRNVVLGWLDEFKAEHPN 120

Query: 121 VVPYLYLNDNISNLAESGLDVVIRYGELADSSLISRKLATS-RRVLCASPAYLARKGIPK 179
           +   L LND+ ++L    +D+ +R+G   DSSL++  +A    RV CASP YLAR G P+
Sbjct: 121 IRLQLMLNDSNADLFRETVDIALRFGVPQDSSLVALPIAPDHHRVACASPDYLARHGTPR 180

Query: 180 TPQDLAQHDCLAMVRSNEEMKTWHFQENEQHKVITVVPKSFADDGEVIRQWALAGMGIAL 239
            P +L++H  L  +R  +  KTW F++ +Q + + V     ++DGE++R+WAL G GIA 
Sbjct: 181 EPMELSRHSALRYMRQGQVSKTWRFRQADQLQEVEVTGDFLSNDGEIVRRWALGGHGIAY 240

Query: 240 KSILDVQDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFIDFLIE 299
           K+ LDV  D+   RLV +L+ +            A  N++   R    +R+++   FL +
Sbjct: 241 KARLDVIGDIAAGRLVALLEDW--------QGEPAPFNLMCPHRLQVSERVKVLHRFLQQ 292

Query: 300 QC 301
           +C
Sbjct: 293 RC 294