Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  195 bits (495), Expect = 1e-54
 Identities = 104/302 (34%), Positives = 169/302 (55%), Gaps = 9/302 (2%)

Query: 1   MDKFADMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTE 60
           MDK   M +F  +++    +A  RE+  +  T++  L+ALE   G KL+ RSTR LSLT+
Sbjct: 1   MDKLNAMAIFVRVIERGSFSAVAREMQTTQPTISKILRALETELGGKLIARSTRQLSLTD 60

Query: 61  SGVLYHQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPE 120
            G  Y+  C EIL +V   E+  QTG + + G L++ +    G+ HIA  L+ F +QYP+
Sbjct: 61  EGQRYYSHCREILAAVDAAEHSFQTGKEAIAGPLRIGSSVSFGRLHIAARLSDFLQQYPD 120

Query: 121 VVPYLYLNDNISNLAESGLDVVIRYGELADSSLISRKLATSRRVLCASPAYLARKGIPKT 180
           V   L LND++ ++   GLDV +R GEL DS LI+R++ T+ RV  ASP YLAR   P+T
Sbjct: 121 VQVDLQLNDHLQDMVSEGLDVTLRIGELRDSGLIARQIGTTHRVTLASPDYLARHPAPQT 180

Query: 181 PQDLAQHDCLAMVRSNEEMKTWHFQENEQHKVITVVPKSFADDGEVIRQWALAGMGIALK 240
           P +L+QH+CL +         W +++    + + +   + +++ E +R+  L G+GIAL 
Sbjct: 181 PHELSQHNCL-LFNLLSSQNQWVYEKEGTRQSVRITGNAQSNNSEAVREMVLTGLGIALS 239

Query: 241 SILDVQDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFIDFLIEQ 300
            +    DDL   R+V +L  Y        +A    ++ +    + Q  R++ F+D++ + 
Sbjct: 240 PLWLFYDDLKAGRVVALLQDY--------TAQSLPIHAVSAPNRRQSARVKAFVDYMADA 291

Query: 301 CA 302
            A
Sbjct: 292 LA 293