Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  185 bits (470), Expect = 1e-51
 Identities = 111/308 (36%), Positives = 164/308 (53%), Gaps = 14/308 (4%)

Query: 1   MDKFADMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTE 60
           MD F  M ++  +V+   + AA +   +S   V   L+ALE R GV LL R+TR  SLTE
Sbjct: 1   MDLFQAMSVYVKVVETGSMTAAAQACGMSTTMVGNHLRALEQRLGVSLLKRTTRKQSLTE 60

Query: 61  SGVLYHQACLEILNSVRETENLLQTGSKEV-RGTLKVSAPRDIGKQHIAPILAAFTEQYP 119
            G  Y+Q CLE+L  V ++E L +    +V +GTL+++AP   G + + P L+ F+ +YP
Sbjct: 61  FGGQYYQRCLEVLGLVADSEQLAEQAHSDVPKGTLRITAPPVFGTERLTPALSEFSRRYP 120

Query: 120 EVVPYLYLNDNISNLAESGLDVVIRYGELADSSLISRKLATSRRVLCASPAYLARKGIPK 179
            +  Y+ L++   +L +SG D  IR GEL  SSLI+R +      LCASP YLAR+G P+
Sbjct: 121 LINLYVVLSNERMDLVDSGFDAAIRLGELETSSLIARPMQAYTLTLCASPDYLARRGTPQ 180

Query: 180 TPQDLAQHDCLAMV-----RSNEEMKTWHFQENEQHKVITVVPKSFADDGEVIRQWALAG 234
           TP DL  HDCLA          +  K W          + V      +  + +RQ A+ G
Sbjct: 181 TPDDLQHHDCLAFAYPASDNWRDADKLWRMTGESGEVEVPVSGSLTINSSQGLRQAAVNG 240

Query: 235 MGIALKSILDVQDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFI 294
           MGI + +   VQ DL   +LV +L  Y              +++LY   +Y+  +LR F+
Sbjct: 241 MGIIMLADALVQPDLESGKLVALLTTY--------RLPSRPMHLLYGQDRYRLPKLRAFV 292

Query: 295 DFLIEQCA 302
           DF +E+ A
Sbjct: 293 DFAMEKWA 300