Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  176 bits (447), Expect = 5e-49
 Identities = 102/305 (33%), Positives = 167/305 (54%), Gaps = 13/305 (4%)

Query: 1   MDKFADMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTE 60
           MD+   +  F S+    GL AA +   ++PA +  RL ALE+R GVKLL R+TR ++LT 
Sbjct: 1   MDRLKQLESFVSVATRGGLTAAAKAEGVAPAIMGRRLDALEERLGVKLLVRTTRRITLTH 60

Query: 61  SGVLYHQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPE 120
            G  + + C  +L      E  +  G  +  G L+V+AP   G++H+AP++  F   +PE
Sbjct: 61  EGSAFLEDCQRLLTEFANAEASVSAGGVKASGHLRVTAPAGFGRRHVAPLVPRFHALHPE 120

Query: 121 VVPYLYLNDNISNLAESGLDVVIRYGELADSSLISRKLATSRRVLCASPAYLARKGIPKT 180
           V   L L+D + ++     D  +R G+L DSSL+S +LA +RR   A+P ++ R G PK 
Sbjct: 121 VTISLNLSDRVVDVTGESFDCAVRVGDLPDSSLVSVRLADNRRRCVATPDFVRRHGKPKH 180

Query: 181 PQDLAQHDCLAMVRSNEEMKTWHFQ---ENEQHKVITVVPKSFAD--DGEVIRQWALAGM 235
           P +L++  CL +     + + W F+   E    ++I + P    D  DG+V+  W LAG 
Sbjct: 181 PGELSRFACLTLSSDASQTRGWAFRITTEAGVQELIHLRPSGPLDCSDGQVLHDWCLAGH 240

Query: 236 GIALKSILDVQDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFID 295
           GIA +S  +V+ +++   LV +LD +        +A    +  ++   ++ P R+RL++D
Sbjct: 241 GIAWRSTWEVEAEIDAGLLVPLLDEF--------AAPPNGIYAVFAGAKHLPLRVRLWLD 292

Query: 296 FLIEQ 300
           FL EQ
Sbjct: 293 FLKEQ 297