Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  170 bits (431), Expect = 3e-47
 Identities = 96/299 (32%), Positives = 168/299 (56%), Gaps = 8/299 (2%)

Query: 2   DKFADMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTES 61
           D+  ++ +F  + +    +AA R L  +P+TV+  +Q LEDR  V+L +R++R L LT  
Sbjct: 3   DRIRELDVFLRVTEETSFSAAARSLDCNPSTVSKLIQRLEDRLRVRLFHRTSRVLKLTRE 62

Query: 62  GVLYHQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPEV 121
           G  + +    +L+++ E EN LQ       G L+ ++   + +  ++P++  F E++P +
Sbjct: 63  GEQFLEGAHRVLDALEEAENGLQNTKTRASGVLRFNSSLLLAQHQLSPVIPEFLERHPHM 122

Query: 122 VPYLYLNDNISNLAESGLDVVIRYGELADSSLISRKLATSRRVLCASPAYLARKGIPKTP 181
                L  +  +L E+ +D+  + G++ DSSL++R++AT+R  LCASP YL++ GIP T 
Sbjct: 123 RVEFVLTASPIDLFENHIDLSFQSGDIPDSSLVARRIATTRWTLCASPKYLSKAGIPMTL 182

Query: 182 QDLAQHDCLAMVRSNEEMKTWHFQENEQHKVITVVPKSFADDGEVIRQWALAGMGIALKS 241
           QDL QH+C+  + +     TW  Q+  +   + V     ++  E++R +A+AG+GI   S
Sbjct: 183 QDLQQHNCMNFL-AGSVRSTWALQDGSEPVALNVNGNIGSNSAELLRAYAIAGVGIVRLS 241

Query: 242 ILDVQDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFIDFLIEQ 300
            + V  DL   RL+ VL+ Y         AS   + V+Y S++    R+R F+DFL E+
Sbjct: 242 DVHVAADLAAGRLIRVLEKYQ-------LASEEPIYVVYPSKRNLSPRVRAFLDFLNEK 293