Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., LysR family transcriptional regulator from Variovorax sp. OAS795

 Score =  167 bits (422), Expect = 4e-46
 Identities = 99/320 (30%), Positives = 167/320 (52%), Gaps = 31/320 (9%)

Query: 1   MDKFADMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTE 60
           MD+   +  F S+    GL AA +   ++PA +  RL ALE R GVKLL R+TR ++LT 
Sbjct: 1   MDRLKQLESFVSVATRGGLTAAAKAEGVAPAIMGRRLDALEARLGVKLLVRTTRRITLTH 60

Query: 61  SGVLYHQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPE 120
            G  + + C  +L      E  +  G  +  G L+V+AP   G++H+AP++  F   +PE
Sbjct: 61  EGSAFLEDCQRLLTEFANAEASVSAGGVKASGHLRVTAPAGFGRRHVAPLVPRFHALHPE 120

Query: 121 VVPYLYLNDNISNLAESGLDVVIRYGELADSSLISRKLATSRRVLCASPAYLARKGIPKT 180
           V   L L+D + ++     D  +R G++ DSSL+S +LA +RR   A+P ++ R G+P+ 
Sbjct: 121 VTISLNLSDRVVDVRGESFDCAVRVGDMPDSSLVSVRLADNRRRCVATPEFVRRFGMPRH 180

Query: 181 PQDLAQHDCLAMVRSNEEMKTWHFQ---------------------ENEQHKVITVVPKS 219
           P +LA+  CL +     + + W F+                     E+   ++I + P+ 
Sbjct: 181 PGELARFACLTLSSDASQTRGWAFRVPRTAQGRGQERTLAGAGVPTEDGGEELIYLRPEG 240

Query: 220 FAD--DGEVIRQWALAGMGIALKSILDVQDDLNQQRLVTVLDGYMKNFNASTSASGADLN 277
             D  DG+V+  W LAG GIA +S  +V+ +++   LV +LD +        +A    + 
Sbjct: 241 PLDCSDGQVLHDWCLAGHGIAWRSTWEVEAEIDAGLLVPLLDEF--------AAPPNGIY 292

Query: 278 VLYLSRQYQPKRLRLFIDFL 297
            ++   ++ P R+RL++DFL
Sbjct: 293 AVFTGTKHLPLRVRLWLDFL 312