Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  182 bits (463), Expect = 6e-51
 Identities = 105/297 (35%), Positives = 166/297 (55%), Gaps = 10/297 (3%)

Query: 1   MDKFADMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTE 60
           M+ + DM +FA +++     AA   L +S  +V+ RL  LE+R GV+LLNRSTR L  T 
Sbjct: 1   MNPYEDMRIFAQVMEAGSFTAAADRLGMSKQSVSRRLMQLEERLGVRLLNRSTRRLDATP 60

Query: 61  SGVLYHQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPE 120
            G  Y+Q+ L +L  V++ E+ +   ++ +RGTL++SAP      H+  +L  F + +P+
Sbjct: 61  LGQHYYQSALRLLGEVQQVEHDISGQAQVLRGTLRLSAPLSFAMAHLGCLLTEFLQLHPQ 120

Query: 121 VVPYLYLNDNISNLAESGLDVVIRYGELADSSLISRKLATSRRVLCASPAYLARKGIPKT 180
           V   + L+D   +L   G D+ +R G L DSSLI+R++A+  RV CASPAYL  +G+P  
Sbjct: 121 VDVEVDLSDRAVDLIGEGYDLALRIGALEDSSLIARRIASVERVYCASPAYLQARGVPGK 180

Query: 181 PQDLAQHDCLAMVRSNEEMKTWHFQENEQHKVITVVPKSFADDGEVIRQWALAGMGIALK 240
           P +LA HDCL    S +    W F +  + + I V  +  A++GE++R  A+AGMG+   
Sbjct: 181 PDELAAHDCLPYGHSRQVQ--WQFHKGGKTQAIQVTGRMRANNGELLRGAAIAGMGVTYL 238

Query: 241 SILDVQDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFIDFL 297
               V   L + +LVTVLD +              L+ +Y   +   + ++ F+ FL
Sbjct: 239 PTFIVGQALAEGQLVTVLDEW--------RPPALQLSAVYPQHRQVARPVQGFVSFL 287