Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., HTH-type transcriptional regulator DmlR from Pseudomonas sp. DMC3

 Score =  168 bits (426), Expect = 1e-46
 Identities = 95/300 (31%), Positives = 172/300 (57%), Gaps = 6/300 (2%)

Query: 1   MDKFADMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTE 60
           MDK   + +F   V+  G ++A R+L +S ++VT ++  LE+  G  LLNR+TR+ S+T 
Sbjct: 30  MDKLLALKMFVETVRCGGYSSAARKLGISTSSVTRQVAGLENELGASLLNRTTRNTSVTV 89

Query: 61  SGVLYHQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPE 120
           +G  Y +  + IL+++ E + ++     + +G L++S P + G++ IAP L+   E++P 
Sbjct: 90  AGQTYFEKAVAILDAIDEADAVVADRGSDAQGRLRISVPVEFGRRLIAPHLSRLLERHPG 149

Query: 121 VVPYLYLNDNISNLAESGLDVVIRYGE-LADSSLISRKLATSRRVLCASPAYLARKGIPK 179
           +   L L+D +S+L    +DV +R G  +    ++S+++   +R + ASP YLAR G+ +
Sbjct: 150 LEISLSLSDQVSDLLSEQIDVSVRLGSTVVSEDIVSKRVGHFQRWIVASPDYLARSGVLE 209

Query: 180 TPQDLAQHDCLAMVRSNEEMKTWHFQENEQHKVITVVPKSFADDGEVIRQWALAGMGIAL 239
            P+DL +H CL           W FQ +E+   + V  +  +++ +++R+ A+ G G+AL
Sbjct: 210 HPRDLLEHQCLRFDYGGSH-HHWTFQGDEEPIQLNVQGRLQSNNADILREAAIGGGGVAL 268

Query: 240 KSILDVQDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFIDFLIE 299
            +   V+DD+   RL  +L+ Y  N  +++S     +N LYL       R+ +FIDFL+E
Sbjct: 269 LADWLVRDDVAAGRLTRLLEHYEVNPGSASSC----INALYLPNHRGSSRINVFIDFLVE 324