Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., Transcriptional regulator, LysR family from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  185 bits (469), Expect = 1e-51
 Identities = 106/309 (34%), Positives = 171/309 (55%), Gaps = 15/309 (4%)

Query: 1   MDKFADMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTE 60
           +DK   +  F ++     L AA +   ++PA +  RL ALE R GVKL+ R+TR ++LT 
Sbjct: 1   VDKLKQLETFVAVATRGSLTAAAKAEGVAPAIIGRRLDALETRLGVKLMVRTTRRITLTH 60

Query: 61  SGVLYHQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPE 120
            G  + + C  +L  +   E  +  G  +  G L+++AP   G++H+AP++  F E +PE
Sbjct: 61  EGSAFLEDCQRLLVDMANAEASVSAGGVKASGHLRITAPAGFGRRHVAPLVPRFRELHPE 120

Query: 121 VVPYLYLNDNISNLAESGLDVVIRYGELADSSLISRKLATSRRVLCASPAYLARKGIPKT 180
           V   L L+D + ++A    D  +R G+L DSSL+S +LA +RR+  A+P YL + G P+ 
Sbjct: 121 VTISLNLSDRVVDVAGEAYDCAVRVGDLPDSSLVSVRLADNRRLCVATPRYLQQNGRPQV 180

Query: 181 PQDLAQHDCLAMVRSNEEMKTWHFQENE-----QHKVITVVPKSFAD--DGEVIRQWALA 233
           P DLA+ DCL +     + + W F         + ++  + P    D  DG+V+R+W LA
Sbjct: 181 PTDLARFDCLTLSSDASQTRGWAFSVPAPGGLGEVEIAHLRPNGPLDCSDGQVLREWCLA 240

Query: 234 GMGIALKSILDVQDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLF 293
           G GIA +S  +V+ D+   RL +VLD +        +A    + VL+  R++   R+RL+
Sbjct: 241 GYGIAWRSTWEVEADIAAGRLESVLDDF--------AAPPNGIFVLFPQRKHLALRVRLW 292

Query: 294 IDFLIEQCA 302
           IDFL  + A
Sbjct: 293 IDFLKHEYA 301