Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., HTH-type transcriptional regulator DmlR from Azospirillum sp. SherDot2

 Score =  189 bits (479), Expect = 1e-52
 Identities = 102/300 (34%), Positives = 171/300 (57%), Gaps = 9/300 (3%)

Query: 1   MDKFADMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTE 60
           MD+  DM+ F  +V  +   AA   L+LS + V+ R+  LE+R G +LLNR+TR LSLTE
Sbjct: 1   MDRLDDMLAFIKVVDTKSFTAAADRLNLSKSVVSRRIGELENRLGARLLNRTTRKLSLTE 60

Query: 61  SGVLYHQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPE 120
            G  Y++ C  IL  + E E  +       RG L+++AP   G  H+AP +A F E+YP 
Sbjct: 61  VGQAYYERCTRILADLEEAEQAVADLHAAPRGRLRLNAPVSFGIMHLAPAVAEFLERYPA 120

Query: 121 VVPYLYLNDNISNLAESGLDVVIRYGELADSSLISRKLATSRRVLCASPAYLARKGIPKT 180
           +   + LND   +L + G D+ +R G L DSSLI+R+LA +R  LCASPAYL + G+P+T
Sbjct: 121 IEIDMDLNDRTVDLVDEGYDLAVRIGRLRDSSLIARRLAPARMALCASPAYLQKHGVPQT 180

Query: 181 PQDLAQHDCLAMVRSNEEMKTWHFQENEQHKVITVVPKSFADDGEVIRQWALAGMGIALK 240
           P +L+ H CL +  +      W F  + + + + V     +++G+++R+ A +G+G  + 
Sbjct: 181 PDELSNHACL-IYTNVPTPDLWPFIVDGEMRSVRVTGPIRSNNGDLLREAAASGVGFIMS 239

Query: 241 SILDVQDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFIDFLIEQ 300
                   L++  LV++L  ++         +   +N +Y   ++   ++R+F+DFL+++
Sbjct: 240 PTFLCGQALSRGELVSILHRHV--------PAEVSVNAVYPQNRHLSPKVRVFVDFLVQR 291