Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

 Score =  172 bits (435), Expect = 1e-47
 Identities = 108/304 (35%), Positives = 161/304 (52%), Gaps = 16/304 (5%)

Query: 6   DMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTESGVLY 65
           ++ LF  I + + ++AA R+L L+PA  +A+L  LE +   +L++R+TR  +LTE G+ +
Sbjct: 5   ELNLFVRIAQLRSISAAARDLGLTPAGASAKLLVLERKLSARLVHRTTRQATLTEDGLAF 64

Query: 66  HQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPEVVPYL 125
                 I+ +       L       RGTL+++AP    + HI P LA F  QYP++   L
Sbjct: 65  LPHAEHIVVAAEAARAALGREQAAPRGTLRIAAPASFARMHIVPGLADFCRQYPDLALDL 124

Query: 126 YLNDNISNLAESGLDVVIRYGELADSSLISRKLATSRRVLCASPAYLARKGIPKTPQDLA 185
            ++D+I +L E   DV +RY EL+DSS ++R+LA   RVL ASP YL + G P TP DLA
Sbjct: 125 RISDSIVDLVEGAFDVAVRYTELSDSSFVARRLAPDNRVLVASPEYLEKHGRPSTPDDLA 184

Query: 186 QHDCLAMVRSNEEMKTWHFQENEQHKV-ITVVPKSFADDGEVIRQWALAGMGIALKSILD 244
           +H CL +      +  W F+      +   V P    +DG  +R  A AG+GIAL +   
Sbjct: 185 EHTCLVV----GALDLWTFRGKGSVVIERRVTPSLRINDGTAVRDAASAGLGIALMATWC 240

Query: 245 VQDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFIDFLIEQCAFR 304
             ++L    LV VL  Y          S   L  LY S +    ++R+FID+L+     R
Sbjct: 241 ASEELQSGALVPVLPEY-------PLISTQTLWALYPSSRELAPKVRVFIDWLVN----R 289

Query: 305 LGNQ 308
            GNQ
Sbjct: 290 FGNQ 293