Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

 Score =  182 bits (461), Expect = 1e-50
 Identities = 108/301 (35%), Positives = 167/301 (55%), Gaps = 11/301 (3%)

Query: 2   DKFADMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTES 61
           ++  +M +F S  + Q  +AAGR L LSP+ V+  +  +EDR G +LL RSTR ++LT  
Sbjct: 3   NRTGEMEVFVSAAELQSFSAAGRRLKLSPSAVSKLVTRIEDRLGTRLLVRSTRMMTLTPE 62

Query: 62  GVLYHQACLEILNSVRETENLLQTGSKEV-RGTLKVSAPRDIGKQHIAPILAAFTEQYPE 120
           G +Y      IL  + +TE ++  G K V RG L+V+A    G++ + P++ AF E YPE
Sbjct: 63  GEIYLARARRILADIADTEQIVAAGGKLVPRGLLRVNASVGFGERFLLPLIPAFLELYPE 122

Query: 121 VVPYLYLNDNISNLAESGLDVVIRYGELADSSLISRKLATSRRVLCASPAYLARKGIPKT 180
           V   + L D I  L E   D+ IR G + DSSL +RKL  SRRV+ ASP+Y+ R G+P+T
Sbjct: 123 VQLDISLTDGIIGLIEERTDIAIRSGAMDDSSLKARKLLESRRVIIASPSYIKRHGMPQT 182

Query: 181 PQDLAQHDCLAMVRSNEEMKTWHFQENEQHKV--ITVVPKSFADDGEVIRQWALAGMGIA 238
           P DLA H+C +       +  W F++    ++  + V   S  + G ++R+  LAG G+ 
Sbjct: 183 PADLAAHNCFSF-NFRRSLNEWPFRDPGSTEIYRLPVSGNSSVNSGMIMRRLCLAGSGLG 241

Query: 239 LKSILDVQDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFIDFLI 298
                 VQ D++   LV VL+ Y  +          +++ ++   ++   R+R FIDFL 
Sbjct: 242 RVGQFHVQPDIDAGTLVPVLEDYNPD-------DIEEIHAVFAGHEHLATRIRAFIDFLA 294

Query: 299 E 299
           E
Sbjct: 295 E 295