Pairwise Alignments

Query, 308 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

 Score =  196 bits (497), Expect = 7e-55
 Identities = 116/296 (39%), Positives = 169/296 (57%), Gaps = 9/296 (3%)

Query: 6   DMVLFASIVKNQGLAAAGRELSLSPATVTARLQALEDRYGVKLLNRSTRHLSLTESGVLY 65
           D+  F  +   Q LAAA R L ++P+ VT RLQ LE R GV+LL R++R L LTE G L 
Sbjct: 6   DLEFFRIVSTAQSLAAAARALDVTPSAVTQRLQQLEQRLGVRLLERTSRRLHLTEEGQLL 65

Query: 66  HQACLEILNSVRETENLLQTGSKEVRGTLKVSAPRDIGKQHIAPILAAFTEQYPEVVPYL 125
            Q  +EIL ++ E    L    + V G L+V+AP   G+ +IAP +A   EQ+PEV   L
Sbjct: 66  AQRGVEILTNMEEMTEQLLERRQVVTGHLQVAAPFGFGRLYIAPAMAQLREQHPEVKLTL 125

Query: 126 YLNDNISNLAESGLDVVIRYGELADSSLISRKLATSRRVLCASPAYLARKGIPKTPQDLA 185
            L ++  +L     +V+I  G L DSSLI  +LA +RR+LCA+P+YL R G+P  P+ L 
Sbjct: 126 SLFEDPVSLRSDAWNVLIHVGPLTDSSLIVHRLAPNRRILCAAPSYLERHGVPDRPETLN 185

Query: 186 QHDCLAMVRSNEEMKTWHFQENEQHKV-ITVVPKSFADDGEVIRQWALAGMGIALKSILD 244
           QH C  +   + ++  W F   E+  + + + P   ++DGEVI+QWALAG+GI ++S  D
Sbjct: 186 QHACAVIREDHADVTLWRFSHQEKPPLTLRIQPAMSSNDGEVIKQWALAGLGIIIRSEWD 245

Query: 245 VQDDLNQQRLVTVLDGYMKNFNASTSASGADLNVLYLSRQYQPKRLRLFIDFLIEQ 300
           V +DL + RLV +L  +            AD+  L  +R  +  R   F+  L +Q
Sbjct: 246 VAEDLRRGRLVALLPDW--------QLPDADVVALLDNRSGRVARTVCFLQILKQQ 293