Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., DEAD/DEAH box helicase from Rhodanobacter sp000427505 FW510-R12

 Score =  287 bits (735), Expect = 4e-82
 Identities = 174/412 (42%), Positives = 241/412 (58%), Gaps = 14/412 (3%)

Query: 23  MSFSSLALSADLIQALPK-AITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLL 81
           MSF SL L+  L++AL     T+P+ IQ   IP  L G D+ A A TG+GKT A+ LPLL
Sbjct: 1   MSFDSLGLAPALLRALADYGYTQPTPIQAAAIPPALEGHDLLAAAQTGTGKTAAFALPLL 60

Query: 82  ERLKTSPEQ-----QALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQNAL 136
           ++L TS +      +AL+L PTRELA Q+ E +   G  + ++   + GGV    Q NAL
Sbjct: 61  QKLSTSGQTMTRRPRALILTPTRELAAQIHENMRDYGKHIHVSAATIFGGVGMGPQINAL 120

Query: 137 AENPNILVATTGRLFD-LTQSGLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGVRQ 195
               ++++AT GRL D L Q  L L+ V TLVLDEADR+LDMGF P ++ +       RQ
Sbjct: 121 RRGVDVVIATPGRLIDHLQQRTLDLSAVETLVLDEADRMLDMGFLPALKRILQSVPKKRQ 180

Query: 196 TVMCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVALLKQ 255
           T++ SATF+  +K  A   M  P ++S +  N++   V   ++ V+   K   L+ +L Q
Sbjct: 181 TLLFSATFAPAIKALALDFMHNPREISVSAPNTVTTLVSHQVHPVDASRKRDLLLHVLSQ 240

Query: 256 HQWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLIAT 315
               Q LVF   K  AD L   LN +G+ A  +HG+KSQ+ R  ALA+FK+G   VL+AT
Sbjct: 241 DSRRQTLVFSRTKHGADKLVTFLNASGLRAAAIHGNKSQNARTRALADFKSGRVTVLVAT 300

Query: 316 DLLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDALNATRT 375
           D+ ARGI IE LP+VINF+LP  AE YVHR+GRT RAG  G+ALSLV H E   L   R 
Sbjct: 301 DIAARGIDIEQLPIVINFDLPSVAEDYVHRIGRTGRAGMEGLALSLVSHDESGLLFDIRK 360

Query: 376 LTQRELPVQNLEGFPVTDQPST--GESKRAPRDKQANRRTQNKKSVKQFQGK 425
           L ++++ +  + G+    +PS        APR KQ     + ++   + QGK
Sbjct: 361 LLKQDIAITPVAGY----EPSAPLRLDAGAPRPKQGGGGQRQQQRAPR-QGK 407