Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 570 a.a., ATP-dependent RNA helicase RhlE from Xanthobacter sp. DMC5

 Score =  246 bits (627), Expect = 2e-69
 Identities = 150/400 (37%), Positives = 226/400 (56%), Gaps = 15/400 (3%)

Query: 24  SFSSLALSADLIQALPKAI-TEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLLE 82
           SFSSL L+  +++AL +A    P+ IQ   IP +L G+D+  +A TG+GKT A+ LP+L+
Sbjct: 27  SFSSLGLAEPIVRALTEANHVTPTPIQAEAIPQVLAGRDLIGIAQTGTGKTAAFALPILD 86

Query: 83  RLKTSPEQ------QALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQNAL 136
           RL   P +      +ALVL PTREL+ Q+ +     G    ++     GGV    Q  AL
Sbjct: 87  RLVRHPRRPDPKSVRALVLSPTRELSGQIVDNFEKFGRHARISVTLAIGGVPMGRQIRAL 146

Query: 137 AENPNILVATTGRLFDLTQS-GLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGVRQ 195
           A   ++LVAT GRL DL ++  ++L++V  LVLDEAD++LDMGF   ++A+  +    R 
Sbjct: 147 ARGVDVLVATPGRLMDLVENHAVKLDQVEVLVLDEADQMLDMGFVHAIRAIVRRLPHKRH 206

Query: 196 TVMCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVALLKQ 255
           ++  SAT    +   A  ++  P +V+  P       V++ +  V+K +K Q L  +L  
Sbjct: 207 SLFFSATMPPAIAELAGGMLHDPVRVAVTPVAKTADRVEQRVIHVDKPNKGQLLAEVLST 266

Query: 256 HQWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLIAT 315
            +  + LVF   K  AD + + L K GI A  +HG+KSQ++R+  L  F+ G  + LIAT
Sbjct: 267 EEIDRALVFARTKHGADKVVRVLAKCGIAAEAIHGNKSQNQRDRVLLAFREGKIRTLIAT 326

Query: 316 DLLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDALNATRT 375
           D+ ARGI +  +  VIN++LP   E+YVHR+GRTARAG+ GIA+S   H E   L +   
Sbjct: 327 DIAARGIDVTGVSHVINYDLPNVPESYVHRIGRTARAGREGIAISFCDHEERAYLKSIER 386

Query: 376 LTQRELPVQNLEG----FPVTDQPSTGESKRAPRDKQANR 411
           L + ++P  +  G    F + D P     +   RD+ A R
Sbjct: 387 LIKLQIPATDRRGAGMRFAIPDAPPI---ELEERDETAER 423