Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., ATP-dependent RNA helicase Bcep18194_A5658 from Variovorax sp. SCN45

 Score =  243 bits (620), Expect = 9e-69
 Identities = 143/353 (40%), Positives = 206/353 (58%), Gaps = 11/353 (3%)

Query: 24  SFSSLALSADLIQALPKAITEP-SAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLLE 82
           SFS+L+L+  L +A+ +   E  + IQ   IP +L+G+DV   A TG+GKT A+ LPLL+
Sbjct: 4   SFSNLSLAEPLARAVAEMGYETMTPIQEQAIPVVLSGQDVMGAAQTGTGKTAAFSLPLLQ 63

Query: 83  RL------KTSPEQ---QALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQ 133
           R+       TSP +   +ALVL+PTRELA QV++ +        L +  + GG+D   Q 
Sbjct: 64  RMLKHENASTSPARHPVRALVLLPTRELADQVAQQIKLYAKYTNLRSTVVFGGIDMKPQT 123

Query: 134 NALAENPNILVATTGRLFD-LTQSGLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAG 192
             L +   +LVAT GRL D +      LN+V  +VLDEADR+LD+GF P +Q + S    
Sbjct: 124 LELKKGVEVLVATPGRLLDHIEAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSYLPK 183

Query: 193 VRQTVMCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVAL 252
            R T++ SATFS ++K  A   ++ P  +     N     V++  Y V+   K +AL  +
Sbjct: 184 QRTTLLFSATFSPEIKRLASSYLQNPITIEVARPNETASTVEQHFYSVSDDDKRRALKQI 243

Query: 253 LKQHQWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVL 312
           ++Q    Q  VF+ +K     L + L + G+  T LHGDKSQ ER  ALA FK G   +L
Sbjct: 244 VRQRGITQAFVFVNSKLGCARLARSLERDGLRTTALHGDKSQDERLKALASFKAGEVDLL 303

Query: 313 IATDLLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHG 365
           + TD+ ARG+ I+ +P V NF++P +AE YVHR+GRT RAG  G+A+S    G
Sbjct: 304 VCTDVAARGLDIKDVPAVFNFDIPFNAEDYVHRIGRTGRAGASGLAVSFASGG 356