Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

 Score =  284 bits (727), Expect = 3e-81
 Identities = 170/411 (41%), Positives = 235/411 (57%), Gaps = 14/411 (3%)

Query: 23  MSFSSLALSADLIQALPK-AITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLL 81
           ++FS L L + L+  L +  I  P+ IQ   IP +L GKDV A A TG+GKT A+GLPL+
Sbjct: 6   ITFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLI 65

Query: 82  ERLKTSPEQQ--------ALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQ 133
           +R    P Q+        ALVLVPTRELA QV + L        L  + + GG     Q 
Sbjct: 66  QRFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQL 125

Query: 134 NALAENPNILVATTGRLFDLTQ-SGLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAG 192
           N L    +IL+AT GRL D      L L +V  LVLDEADR+LDMGF P +Q +  + + 
Sbjct: 126 NHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSP 185

Query: 193 VRQTVMCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVAL 252
           +RQT+  SATF   +K  A ++MR P +V   P NS  + VQ+ +Y V+K  K + L  L
Sbjct: 186 LRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKRELLSYL 245

Query: 253 LKQHQWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVL 312
           +    W QVLVF   ++ +D+L ++L   GI A  ++GDKSQ  R+ AL +FK G  + L
Sbjct: 246 IGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRAL 305

Query: 313 IATDLLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDALNA 372
           IATD+ ARG+ I  L  V+N+++P  AE YVHR+GRT RAG  G+A+SL+ H E   L A
Sbjct: 306 IATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQPQLEA 365

Query: 373 TRTLTQRELPVQNLEGFPVTDQPSTGESKRAPRDKQANRRTQNKKSVKQFQ 423
              L    LP + L+GF    +PS    +     + A R ++ +K   Q +
Sbjct: 366 IERLLNTRLPQEWLKGF----EPSPVVHEENSPRRSAGRSSEKRKLKAQLK 412