Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 421 a.a., RNA helicase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  242 bits (617), Expect = 2e-68
 Identities = 139/421 (33%), Positives = 235/421 (55%), Gaps = 26/421 (6%)

Query: 23  MSFSSLALSADLIQALPK-AITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLL 81
           M F    +S ++ ++L K    +P+ IQ   IP ++ G+DV A+A TG+GKT A+ +P+L
Sbjct: 1   MRFEDYRISDEIKKSLSKLGFKKPTDIQFKAIPPIMKGEDVLAIAQTGTGKTAAFAIPVL 60

Query: 82  ERLKTSPEQQ------ALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQNA 135
           +RL+ S  ++       +V+VPTRELA+Q++EV   +G    + T C+ GGV++  Q   
Sbjct: 61  DRLQFSKNRKRGDGIKCVVMVPTRELALQITEVFNEIGRGTRVTTFCVYGGVEQGPQIAK 120

Query: 136 LAENPNILVATTGRLFDLTQSG-LRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGVR 194
           L +  ++LVAT GRLFDL   G + L+RV  LVLDEAD +LD+GF   ++ L ++    R
Sbjct: 121 LEDGIDVLVATPGRLFDLVSQGHIHLHRVEVLVLDEADHMLDLGFIHDIRQLITKLPRQR 180

Query: 195 QTVMCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVALLK 254
           QT+  SAT ++ +K  A  L+  P ++  +P++ + +++  ++  V+   K   L  +++
Sbjct: 181 QTLFFSATINEKIKELAYSLVNKPVRIQISPKDPVAKSIDHSVMYVDMDDKRFFLERVVQ 240

Query: 255 QHQWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLIA 314
           ++   ++L F+  K  A+ +   + + GI A  +HG K Q +R   + +FK G  ++L+A
Sbjct: 241 ENSDKKILAFVRTKVRAERVVAAMERVGIQAISIHGGKEQKDRLDVMRKFKKGEVKLLVA 300

Query: 315 TDLLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDALNATR 374
           TD+ ARGI I  +  V+N++LP   E YVHRVGRT R  + GIA+S     E   L+  +
Sbjct: 301 TDVSARGIDIPNVEYVVNYDLPEQPENYVHRVGRTGRGTEKGIAVSFCAPEEKPILDEIQ 360

Query: 375 TLTQRELPVQNL--EGFPVT----------------DQPSTGESKRAPRDKQANRRTQNK 416
               +++ V  +  E +  T                +   T E  +A + K+A  + + K
Sbjct: 361 KYLTKDIKVLEVDKEDYEATIDFSAEAKYDWKALIKEAEQTDEKVKAAKSKKAKAKAKKK 420

Query: 417 K 417
           K
Sbjct: 421 K 421