Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 380 a.a., RNA helicase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  265 bits (678), Expect = 1e-75
 Identities = 159/374 (42%), Positives = 227/374 (60%), Gaps = 10/374 (2%)

Query: 23  MSFSSLALSADLIQALPKAITE-PSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLL 81
           M FS L LSA L++A+   + E P  IQ   IPA+L GKDV  +A TGSGKT ++ LP+L
Sbjct: 1   MPFSKLGLSAPLLKAIEAQLYEQPYPIQQQAIPAILQGKDVLGIAQTGSGKTASFVLPML 60

Query: 82  ERL-KTSPEQ----QALVLVPTRELAMQVSEVLTHVGTALG--LNTLCLCGGVDKTEQQN 134
           E+L +T+P +    +AL+LVPTRELA+QV+EV    G AL   + TL + GGV    Q  
Sbjct: 61  EKLQRTAPSRNRFVEALILVPTRELAVQVNEVFKTFGAALPRRVKTLAVYGGVSINPQML 120

Query: 135 ALAENPNILVATTGRLFDLTQS-GLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGV 193
            L+   ++LVAT GRL DL +S  + L+ V TLVLDEAD++L++GF  ++  + +     
Sbjct: 121 QLS-GTDVLVATPGRLLDLIESRAVHLSEVKTLVLDEADKMLNLGFKEEMDRILALLPPK 179

Query: 194 RQTVMCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVALL 253
           RQ ++ SAT   D++   + L+ +P  ++   E++  + + +  Y V    K   L  L+
Sbjct: 180 RQNILFSATLGGDVQAVQETLLHSPVTIAVETESTSPEQIAQVAYQVAPEKKGPFLRYLI 239

Query: 254 KQHQWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLI 313
           K H   QVLVF+ A   AD+L  KLNK GI A  +H  KSQ  R  AL +FK G  +VL+
Sbjct: 240 KHHSLQQVLVFVSATRTADNLVDKLNKNGIEAAAMHSKKSQGARTDALTKFKAGKLRVLV 299

Query: 314 ATDLLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDALNAT 373
           ATDL +RGI I+LLP VIN++LP   + YVHR+GRT RAG  G A+SL+   +       
Sbjct: 300 ATDLASRGIDIQLLPHVINYDLPRSPKDYVHRIGRTGRAGATGEAISLITPEDAHHFKII 359

Query: 374 RTLTQRELPVQNLE 387
           +    +++PV+  E
Sbjct: 360 QKKMGKQVPVEATE 373