Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 496 a.a., ATP-dependent RNA helicase Bcep18194_A5658 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  242 bits (617), Expect = 2e-68
 Identities = 145/375 (38%), Positives = 210/375 (56%), Gaps = 11/375 (2%)

Query: 24  SFSSLALSADLIQALPK-AITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLLE 82
           SFS L+LS  + +A+ +      + IQ   IP +L G+DV   A TG+GKT A+ LPLL+
Sbjct: 4   SFSELSLSPAIERAVAEMGYATMTPIQAQAIPVVLQGRDVMGAAQTGTGKTAAFTLPLLQ 63

Query: 83  RL------KTSPEQ---QALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQ 133
           R+       TSP +   +ALVL+PTRELA QV+E +        L +  + GG+D   Q 
Sbjct: 64  RMLKHENASTSPARHPVRALVLLPTRELADQVAEQVKLYAKYTNLRSTVVFGGMDMKPQT 123

Query: 134 NALAENPNILVATTGRLFD-LTQSGLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAG 192
             L +   +LVAT GRL D +      LN+V  +VLDEADR+LD+GF P +Q + S    
Sbjct: 124 AELKKGVEVLVATPGRLLDHIEAKNCVLNQVEYVVLDEADRMLDIGFLPDLQRILSYLPK 183

Query: 193 VRQTVMCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVAL 252
            R T++ SATFS ++K  A   ++ P  +     N+    V++  Y V    K   L  +
Sbjct: 184 QRTTLLFSATFSPEIKRLANSYLQDPVTIEVARSNATASTVEQHFYRVEDDDKRGILKQI 243

Query: 253 LKQHQWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVL 312
           L++    Q  VF+ +K     L + L + G+  T LHGDKSQ ER  AL  FK G   +L
Sbjct: 244 LRERGLKQAFVFVNSKLGCARLARSLEREGLNTTALHGDKSQDERLKALEAFKTGAVDLL 303

Query: 313 IATDLLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDALNA 372
           + TD+ ARG+ I+ +P V NF++P +AE YVHR+GRT RAG  G+A+S V   +   +  
Sbjct: 304 VCTDVAARGLDIKDVPAVFNFDIPFNAEDYVHRIGRTGRAGASGLAVSFVSGRDTRLMGD 363

Query: 373 TRTLTQRELPVQNLE 387
              L  ++L ++ LE
Sbjct: 364 LEKLLGKKLELEALE 378