Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., RNA helicase (NCBI) from Escherichia coli BW25113

 Score =  281 bits (718), Expect = 4e-80
 Identities = 160/376 (42%), Positives = 230/376 (61%), Gaps = 9/376 (2%)

Query: 23  MSFSSLALSADLIQALPK-AITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLL 81
           MSF SL LS D+++A+ +    EP+ IQ   IPA+L G+D+ A A TG+GKT  + LPLL
Sbjct: 1   MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60

Query: 82  ERLKTSPEQ-------QALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQN 134
           + L T           +AL+L PTRELA Q+ E +      L + +L + GGV    Q  
Sbjct: 61  QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120

Query: 135 ALAENPNILVATTGRLFDLT-QSGLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGV 193
            L    ++LVAT GRL DL  Q+ ++L++V  LVLDEADR+LDMGF   ++ + ++    
Sbjct: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180

Query: 194 RQTVMCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVALL 253
           RQ ++ SATFSDD+K  A++L+  P ++     N+ +  V + ++ V+K  K + L  ++
Sbjct: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMI 240

Query: 254 KQHQWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLI 313
            +  W QVLVF   K  A+ L ++LNK GI +  +HG+KSQ  R  ALA+FK+G  +VL+
Sbjct: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300

Query: 314 ATDLLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDALNAT 373
           ATD+ ARG+ IE LP V+N+ELP   E YVHR+GRT RA   G ALSLVC  E   L   
Sbjct: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360

Query: 374 RTLTQRELPVQNLEGF 389
             L ++E+P   + G+
Sbjct: 361 EKLLKKEIPRIAIPGY 376