Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., ATP-dependent RNA helicase DbpA from Erwinia tracheiphila SCR3

 Score =  238 bits (606), Expect = 4e-67
 Identities = 134/337 (39%), Positives = 205/337 (60%), Gaps = 4/337 (1%)

Query: 48  IQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLLERLKTSP-EQQALVLVPTRELAMQVS 106
           +Q   +PA+L G+DV A A TGSGKT+A+GL +++ +  +    Q L++ PTRELA QV+
Sbjct: 29  VQAASLPAILAGRDVRAQAKTGSGKTVAFGLGVMQHINAAQFATQGLIICPTRELAEQVA 88

Query: 107 EVLTHVGTALG-LNTLCLCGGVDKTEQQNALAENPNILVATTGRLFD-LTQSGLRLNRVT 164
           E +  +  A   +  L LCGG   + Q+++LA  P+I+V T GR+ D L +  L+L+++ 
Sbjct: 89  EEMRRLARATANMKVLTLCGGQPASAQRDSLARAPHIVVGTPGRIVDHLKRETLKLDQLK 148

Query: 165 TLVLDEADRLLDMGFWPQVQALASQTAGVRQTVMCSATFSDDLKLKAQQLMRAPTQVSAN 224
           TLVLDEADR+L+MGF  ++++L +     RQT++ SAT+  D+K  ++ L   PT V   
Sbjct: 149 TLVLDEADRMLEMGFRDEIESLINYCPSRRQTLLFSATWPHDIKQISRHLQCDPTTVETE 208

Query: 225 PENSINQAVQETLYLVNKGSKTQALVALLKQHQWPQVLVFIGAKENADSLTKKLNKAGIV 284
               ++  +++  Y V+   K  AL+ LL + Q    +VF   K   + +   L    I 
Sbjct: 209 TTPDLSN-IEQFFYEVSPREKPAALIGLLSERQPSSCVVFCNTKRECNEIADALESCQIS 267

Query: 285 ATVLHGDKSQSEREAALAEFKNGTTQVLIATDLLARGIHIELLPVVINFELPMHAETYVH 344
           +  L+GD  Q ERE  L  F NG+ +VLIATD+ ARG+ I+LL +V+N++L    E +VH
Sbjct: 268 SLALNGDLEQREREHVLIRFVNGSCRVLIATDVAARGLDIKLLAMVVNYQLSFDPEVHVH 327

Query: 345 RVGRTARAGQHGIALSLVCHGEMDALNATRTLTQREL 381
           R+GRTARAG+ GIA+S V  GEM    A     Q+++
Sbjct: 328 RIGRTARAGEKGIAISFVAPGEMTRALALEDFLQQKM 364