Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., Superfamily II DNA and RNA helicases from Enterobacter asburiae PDN3

 Score =  226 bits (576), Expect = 2e-63
 Identities = 138/374 (36%), Positives = 214/374 (57%), Gaps = 9/374 (2%)

Query: 24  SFSSLALSADLIQALPK-AITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLLE 82
           +F+ L L A +++AL      +PS IQ   IP +L+G+DV  +A TGSGKT A+ LPLL 
Sbjct: 7   TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAFSLPLLN 66

Query: 83  RLKTSPEQ-QALVLVPTRELAMQVSEVLTHVGTAL-GLNTLCLCGGVDKTEQQNALAENP 140
            +       Q LVL PTRELA+QV+E +T     + G+N + L GG     Q  AL + P
Sbjct: 67  NIDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLRALRQGP 126

Query: 141 NILVATTGRLFDLTQSG-LRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGVRQTVMC 199
            I+V T GRL D  + G L L++++ LVLDEAD +L MGF   V+ + +Q     QT + 
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPDGHQTALF 186

Query: 200 SATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVALLKQHQWP 259
           SAT  + ++   ++ M+ P +V      +    + ++ + V    K +ALV  L+   + 
Sbjct: 187 SATMPEAIRRITKRFMKDPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFLEAEDFD 246

Query: 260 QVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLIATDLLA 319
             ++F+  K     + + L ++G  +  L+GD +Q+ RE  L   K+G   +LIATD+ A
Sbjct: 247 AAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAA 306

Query: 320 RGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDAL-NATR---- 374
           RG+ +E + +V+N+++PM +E+YVHR+GRT RAG+ G AL  V + E   L N  R    
Sbjct: 307 RGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKL 366

Query: 375 TLTQRELPVQNLEG 388
           T+ + +LP  +L G
Sbjct: 367 TIPEADLPNADLLG 380