Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., ATP-dependent RNA helicase RhlE from Dickeya dadantii 3937

 Score =  286 bits (731), Expect = 1e-81
 Identities = 171/417 (41%), Positives = 240/417 (57%), Gaps = 18/417 (4%)

Query: 23  MSFSSLALSADLIQALPK-AITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLL 81
           MSF SL LSAD+++A+ +    EP+ +Q   IP +L G+D+ A A TG+GKT  + LPLL
Sbjct: 1   MSFESLGLSADILRAVEEQGYREPTPVQRQAIPVVLEGRDLMASAQTGTGKTAGFTLPLL 60

Query: 82  ERLKTSPEQ-------QALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQN 134
           + L   P Q       +AL+L PTRELA Q+ E +      L L +L + GGV    Q  
Sbjct: 61  QLLNGRPSQAKGRRPVRALILTPTRELAAQIGENVQAYSKYLRLRSLVVFGGVSINPQMM 120

Query: 135 ALAENPNILVATTGRLFDLT-QSGLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGV 193
            L    +IL+AT GRL DL  Q+ + L+ V  LVLDEADR+LDMGF   ++ + ++    
Sbjct: 121 KLRGGVDILIATPGRLLDLEHQNAVDLSHVEILVLDEADRMLDMGFIHDIRRVLAKLPPK 180

Query: 194 RQTVMCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVALL 253
           RQ ++ SATFSD++K  A +L+  P  V     N+ ++ V + ++ V+K  K + L  L+
Sbjct: 181 RQNLLFSATFSDEIKELAGKLLTNPASVEVVRRNTPSELVTQHVHFVDKKRKRELLSHLI 240

Query: 254 KQHQWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLI 313
            +H W QVLVF   K  A+ L ++LNK GI A  +HG+KSQ  R  ALA FK+G  +VL+
Sbjct: 241 GKHDWRQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALANFKDGDIRVLV 300

Query: 314 ATDLLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDALNAT 373
           ATD+ ARG+ I+ LP V+N+ELP   E YVHR+GRT RA   G ALSLVC  E   L   
Sbjct: 301 ATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAASTGEALSLVCVDEHKLLRDI 360

Query: 374 RTLTQRELPVQNLEGF---------PVTDQPSTGESKRAPRDKQANRRTQNKKSVKQ 421
             L +RE+P   + G+         P+ +    G   R    +Q +R    + S  Q
Sbjct: 361 ERLLKREIPRMEIAGYEPDPTIKAEPIQNGRQGGRGGRGGAPRQGDRPQGERASRPQ 417