Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., DEAD/DEAH family ATP-dependent RNA helicase from Dickeya dadantii 3937

 Score =  229 bits (585), Expect = 1e-64
 Identities = 141/371 (38%), Positives = 212/371 (57%), Gaps = 7/371 (1%)

Query: 24  SFSSLALSADLIQALPK-AITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLLE 82
           SF+SL LSA ++ AL +    +PS IQ   IP +L G+DV  +A TGSGKT A+ LPLL 
Sbjct: 7   SFASLGLSAPILNALSEMGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLN 66

Query: 83  RLKTSPEQ-QALVLVPTRELAMQVSEVLTHVGTAL-GLNTLCLCGGVDKTEQQNALAENP 140
            +K   +  Q LVL PTRELA+QV+E        + G+N + L GG     Q  AL + P
Sbjct: 67  NIKADLKAPQLLVLAPTRELAVQVAEACNEFSKHMQGVNVVALYGGQRYDVQLRALRQGP 126

Query: 141 NILVATTGRLFDLTQSG-LRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGVRQTVMC 199
            I+V T GRL D  + G L L+ ++ LVLDEAD +L MGF   V+ + +Q     QT + 
Sbjct: 127 QIVVGTPGRLLDHLKRGTLDLSNLSGLVLDEADEMLRMGFIEDVENIMAQIPAEHQTALF 186

Query: 200 SATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVALLKQHQWP 259
           SAT  + ++   ++ M  P +V      +    + ++ + V    K +AL+  L+   + 
Sbjct: 187 SATMPEAIRRITRRFMNDPQEVRIQSSVTTRPDISQSYWTVYGMRKNEALIRFLEAEDFD 246

Query: 260 QVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLIATDLLA 319
             ++F+  K     + + L ++G  +  L+GD +Q+ RE  L   K+G   +LIATD+ A
Sbjct: 247 AAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAA 306

Query: 320 RGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDAL-NATRT--L 376
           RG+ +E + +V+N+++PM +E+YVHR+GRT RAG+ G AL  V + E   L N  RT  L
Sbjct: 307 RGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKL 366

Query: 377 TQRELPVQNLE 387
           T  E+ + N E
Sbjct: 367 TIPEVDLPNAE 377