Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 567 a.a., Superfamily II DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  228 bits (580), Expect = 5e-64
 Identities = 131/342 (38%), Positives = 200/342 (58%), Gaps = 4/342 (1%)

Query: 25  FSSLALSADLIQALP-KAITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLLER 83
           F+ L +SA+++QA+     T+PS IQ   IP ML G DV   A TG+GKT ++G+P+++R
Sbjct: 7   FADLGISAEILQAVEGMGYTQPSEIQAQSIPLMLEGHDVIGQAQTGTGKTASFGIPIVDR 66

Query: 84  LKTSPEQ-QALVLVPTRELAMQVSEVLTHVGT-ALGLNTLCLCGGVDKTEQQNALAENPN 141
           + +S +Q QAL+L PTRELA+QV   +T +     G+ +  + GG     Q   L     
Sbjct: 67  VDSSSKQPQALILCPTRELAVQVEGEITKLAKYKKGIFSTAIYGGEAIDRQIRTLKRGVQ 126

Query: 142 ILVATTGRLFDLTQSG-LRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGVRQTVMCS 200
           I+V T GR+ D    G L+L+ V T+VLDEAD +LDMGF   ++ + SQ    RQT+  S
Sbjct: 127 IVVGTPGRVMDHMNRGTLKLDTVKTIVLDEADEMLDMGFREDIETVLSQMPEDRQTIFFS 186

Query: 201 ATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVALLKQHQWPQ 260
           AT +  +    ++    P  V    +    + + +  Y V    K + +  L+  HQ+  
Sbjct: 187 ATMAKPIMDLTRKYQTNPEIVKIQRKELTVENISQVYYEVKPPLKMELITRLINIHQFNL 246

Query: 261 VLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLIATDLLAR 320
            +VF   K   D +T+ L   GI+A  LHGD SQ++R+  + +F+ G   VL+ATD+ AR
Sbjct: 247 GVVFCNTKRATDEVTEGLIARGIMAEALHGDLSQAQRDKVMNKFRKGHCTVLVATDVAAR 306

Query: 321 GIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLV 362
           GI ++ + VV N++LP+  E YVHR+GRT RAG+ G+A+S +
Sbjct: 307 GIDVDNVEVVFNYDLPLDEEYYVHRIGRTGRAGRSGMAISFI 348