Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., Superfamily II DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  225 bits (573), Expect = 2e-63
 Identities = 138/406 (33%), Positives = 232/406 (57%), Gaps = 15/406 (3%)

Query: 22  PMSFSSLALSADLIQALPKA-ITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPL 80
           P SF +  L+  L++A+ +A  T+P+ IQ   IP  L G+D+  +A TG+GKT AY LPL
Sbjct: 5   PQSFENFKLNKQLLEAVKEAGYTKPTPIQEKTIPLALAGQDILGIAQTGTGKTAAYVLPL 64

Query: 81  LERLKTSPEQ--QALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQNALAE 138
           L + K +  +  +AL+L PTREL +Q+ + +  +G    L   CL GGV  T Q   +  
Sbjct: 65  LMKTKYAQGEHARALILAPTRELVIQIEQAILTLGKYTDLRYACLYGGVGPTPQIEKIRA 124

Query: 139 NPNILVATTGRLFDLTQSG-LRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGVRQTV 197
             +I++AT GR  D+   G L +  + T+V+DEAD+++DMGF PQ++++       RQ +
Sbjct: 125 GVDIIIATPGRFMDIYSKGELFVRNIKTMVMDEADKMMDMGFMPQIRSILEVIPVKRQNM 184

Query: 198 MCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLV-NKGSKTQALVALLKQH 256
           + SATFS+ ++  + + +  P ++    + +    V +T Y V N  +K   L  LL+  
Sbjct: 185 LFSATFSERVERISHEFLEFPERIEIALQATTADTVAQTKYFVPNLKTKITLLDHLLQNE 244

Query: 257 QWPQVLVFIGAKENADSLTKKLN--KAGIVATVLHGDKSQSEREAALAEFKNGTTQVLIA 314
           +  +V+VF  +++NA+++ + L   K G +  V+H +K Q+ R  ++ +FK+G  ++L+A
Sbjct: 245 EINRVIVFTKSRKNAEAVYQYLERRKHGEIR-VIHANKGQNTRINSVDDFKSGDVRILVA 303

Query: 315 TDLLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDALNATR 374
           TD+ ARG+ I ++  V+NF++P+  E YVHRVGRT RA Q G A + V   E        
Sbjct: 304 TDVAARGLDISMVSHVVNFDVPLIYEDYVHRVGRTGRAEQEGAAFTFVNPAEEYHFGRIE 363

Query: 375 TLTQRELPVQNLEGFPVTDQPSTGESKRAPRDKQANRRTQNKKSVK 420
            + + E+P +     P+  +    ++  A  +KQA  R  +K+  K
Sbjct: 364 EIIRMEVPEE-----PIPKEVRIADTPFA--EKQAYDREIDKQRQK 402