Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., Superfamily II DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  262 bits (669), Expect = 2e-74
 Identities = 149/405 (36%), Positives = 235/405 (58%), Gaps = 16/405 (3%)

Query: 23  MSFSSLALSADLIQALP-KAITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLL 81
           M F  L +   +++AL  K   EP++IQ   IP +L G+DV   A TG+GKT A+ +P++
Sbjct: 1   MKFKDLRIIPPILKALEDKGYDEPTSIQAQAIPHILEGRDVLGCAQTGTGKTAAFAIPII 60

Query: 82  ERLKTSP-------EQQALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQN 134
           + +  +P       + ++L++ PTRELA+Q+ E +        ++   + GGV +  Q  
Sbjct: 61  QHIHEAPYANEPWAKIRSLIVTPTRELAIQIGENIDEYAKNTNVSHTVIFGGVKQGAQVA 120

Query: 135 ALAENPNILVATTGRLFDLTQSG-LRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGV 193
            L +  +ILVAT GRL DL   G + L  +   VLDEADR+LDMGF   ++ L       
Sbjct: 121 QLKKGVHILVATPGRLLDLIDQGHISLKAIDLFVLDEADRMLDMGFINDIKKLLKILPKK 180

Query: 194 RQTVMCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVALL 253
           RQ++  SAT  D++   +++++  P +V   P +S  + +Q+ +Y  NK SK   L+ +L
Sbjct: 181 RQSLFFSATMPDNILQLSKEILDNPQKVEVTPVSSTAETIQQYIYYTNKSSKKSLLIHIL 240

Query: 254 KQHQWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLI 313
           ++    QVL+F   K  AD + + L K  I A  +HGDK+Q++R+  L++FK+   +VL+
Sbjct: 241 EKEGMDQVLLFSRTKHGADRIVRDLKKKHIKAAAIHGDKAQNQRQRVLSDFKDNKLRVLV 300

Query: 314 ATDLLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDA-LNA 372
           ATD+ ARGI I+ L  VINF++P   ETY+HR+GR+ RAG+ G A+SL C  E +A + A
Sbjct: 301 ATDIAARGIDIDKLKYVINFDIPDTPETYIHRIGRSGRAGEEGTAISL-CEPEENADVKA 359

Query: 373 TRTLTQRELPVQNLEGFPVTDQPSTGESKRAPRDKQANRRTQNKK 417
              L  + + V +   FP TD+P T + K     K+ N+  Q +K
Sbjct: 360 IEKLANKNITVISDHPFPQTDKPMTAQEK-----KEFNKEKQRRK 399