Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., ATP-dependent RNA helicase RhlE from Azospirillum sp. SherDot2

 Score =  250 bits (639), Expect = 6e-71
 Identities = 150/407 (36%), Positives = 226/407 (55%), Gaps = 10/407 (2%)

Query: 25  FSSLALSADLIQALPK-AITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLLER 83
           FS L L   L++A+ +   +  + IQ   IP +L G+DV  LA TG+GKT A+ LP+L+R
Sbjct: 4   FSGLGLIEPLLRAVAEEGYSTATPIQAGAIPLLLAGRDVLGLAQTGTGKTAAFTLPILQR 63

Query: 84  LKTSPEQQA------LVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQNALA 137
           L  + ++ A      L+L PTRELA+Q+ +  T  G  L +    + GGV ++ Q +A+A
Sbjct: 64  LFQNKKRVAAKSPRVLILTPTRELALQIGDSFTTYGRHLPIRRTVIHGGVGQSPQVSAIA 123

Query: 138 ENPNILVATTGRLFDL-TQSGLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGVRQT 196
               +L+AT GRL DL  Q+ + L  +   VLDEADR+LDMGF   V+ + +     RQT
Sbjct: 124 RGVEVLIATPGRLLDLMAQNHVNLGTIEFFVLDEADRMLDMGFIRDVRKVVAVLPKDRQT 183

Query: 197 VMCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVALLKQH 256
           ++ SAT  D +   A  ++    ++   P+++  + + + +  V++  K + L  LL+  
Sbjct: 184 LLFSATMPDAVVDLANSILTDAERIEVTPQSTTVERINQRVLFVDRADKRRLLADLLEDS 243

Query: 257 QWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLIATD 316
              + +VF   K  AD +   L KAGI A  +HGDKSQS R  AL  F+NG  + L+ATD
Sbjct: 244 AMARTIVFARTKHGADRIADHLKKAGITADAIHGDKSQSARVRALESFRNGELRALVATD 303

Query: 317 LLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDALNATRTL 376
           + ARGI I+ +  VINF+LP   E+YVHR+GRTARAG  G A+S   H E+  L      
Sbjct: 304 IAARGIDIDGISHVINFDLPNEPESYVHRIGRTARAGTDGSAVSFCDHEEVGYLKDIEKT 363

Query: 377 TQRELPVQNLEGFPVTDQPST-GESKRAPRDK-QANRRTQNKKSVKQ 421
            ++ +P      +   +       SK  PR K   + R QN ++ +Q
Sbjct: 364 IRQPIPADTTHPYHAVEVAQIHASSKPPPRPKAPGSNRNQNNRNQQQ 410