Pairwise Alignments

Query, 428 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 527 a.a., ATP-dependent RNA helicase RhlE from Azospirillum sp. SherDot2

 Score =  235 bits (599), Expect = 3e-66
 Identities = 140/386 (36%), Positives = 209/386 (54%), Gaps = 6/386 (1%)

Query: 23  MSFSSLALSADLIQALP-KAITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLL 81
           M FS L L  D+++A+  K  T+P+ IQ   IP +L  +DV   A TG+GKT ++ LP++
Sbjct: 1   MLFSELGLGPDVLRAIEDKGYTQPTPIQEQAIPCVLQRRDVLGCAQTGTGKTASFTLPMI 60

Query: 82  ERLKTSPEQ----QALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQNALA 137
           + L +   +    ++L+L PTRELA QVSE     G    L+   L GG   TEQ   L 
Sbjct: 61  DILASGRARARMPRSLILEPTRELAAQVSESFETYGKYHKLSMALLIGGETFTEQVKKLD 120

Query: 138 ENPNILVATTGRLFDLTQSG-LRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGVRQT 196
              ++L+AT GRL DL + G + LN +   V+DEADR+LDMGF P ++ + S+    RQT
Sbjct: 121 RGVDVLIATPGRLIDLFERGNIMLNDIKVFVIDEADRMLDMGFIPDIERIVSKLPKNRQT 180

Query: 197 VMCSATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALVALLKQH 256
           +  SAT   +++  A   +  P ++S  P  S  + V + L LV++  K +AL  LL+  
Sbjct: 181 LFFSATMPPEIRRLADAFLTQPLEISVAPPASPAETVTQALSLVHEMDKRKALRHLLQTE 240

Query: 257 QWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLIATD 316
                 +F   K +   L K L + G     LHGD  QS+R   L  FK G   +L+ +D
Sbjct: 241 DVKNAFIFCNRKRDIAVLQKSLERHGFNVGALHGDMVQSKRTETLERFKQGEITLLVCSD 300

Query: 317 LLARGIHIELLPVVINFELPMHAETYVHRVGRTARAGQHGIALSLVCHGEMDALNATRTL 376
           + ARGI ++ L  V NF++P+  + YVHR+GRT RAG+ G A  L    +   + A   L
Sbjct: 301 VAARGIDVQGLSHVFNFDVPLTPDDYVHRIGRTGRAGKQGRAFMLATPDDTKLVGAITRL 360

Query: 377 TQRELPVQNLEGFPVTDQPSTGESKR 402
            +RE+P+  ++G    +      S R
Sbjct: 361 IKREIPMIAIDGLETAEFGEEDSSSR 386