Pairwise Alignments

Query, 444 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 203 a.a., Na+-driven multidrug efflux pump from Variovorax sp. SCN45

 Score = 57.4 bits (137), Expect = 4e-13
 Identities = 45/183 (24%), Positives = 84/183 (45%), Gaps = 24/183 (13%)

Query: 133 YWLWWLASAWTGAMLYFYYSVCRANGNTLLPGTLMMVTSVLNLILDPIFIFTFD----LG 188
           Y  W L S     +L+   ++ R  G+  +   ++ +++ LN++L P+ IF       LG
Sbjct: 10  YTQWMLGSNAVIMLLFVINAILRGAGDAAISMRVLWLSNGLNIVLCPLLIFGPGPFPALG 69

Query: 189 IDGAAIATIIAFGVGIAI-----------VAPKVAQRQWTSYQWQDLNISQSLTALGHIM 237
           I+GAAIAT I  G G+             +   +AQ  W      ++ +  SL  +G + 
Sbjct: 70  IEGAAIATCIGRGTGVLYQLWALFRGGTHIRVTMAQLAWRGAMLWNI-VRTSLGGIGQM- 127

Query: 238 GPAMLSQLLPPLSSMFATKLLASFGTAAVAAWALGSRFEFFALVAVLAMTMSLPPMIGRM 297
                  ++   + +F  ++LA+ G+ AVA   +  R   F ++    M+ +   ++G+ 
Sbjct: 128 -------IVAMTAWIFLMRILATIGSEAVAGATIAIRIMMFTMMPAWGMSNAAATLVGQN 180

Query: 298 LGA 300
           LGA
Sbjct: 181 LGA 183