Pairwise Alignments

Query, 444 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 484 a.a., MATE efflux family protein from Variovorax sp. SCN45

 Score =  127 bits (319), Expect = 8e-34
 Identities = 106/422 (25%), Positives = 197/422 (46%), Gaps = 6/422 (1%)

Query: 7   TSSLAKQLFQMTWPMLFGVLSLMSFQLVDSAFIGQLGVLPLAAQ-GFTMPIQMVIIGIQV 65
           + SL + +  M      G++++ +  L++  +I  LG    AA  GF   +      + +
Sbjct: 17  SGSLMRHVCVMAGTGAIGLIAVFAVDLINLFYISLLGEKETAAAVGFAGVVGFFHASLCI 76

Query: 66  GLGIATTAVISRAIGAGKTEYAKQLG--GLVIVIGGIGVALIALVLYLLRQPLLGLLGAP 123
           GL I   AV+SR +GAG+ + A+++G   LV+++    +A      +L   P L  LGA 
Sbjct: 77  GLTIGIAAVVSRTVGAGRMDDARRIGTSSLVLMVALSVLAGTGTAFFL--HPALQALGAQ 134

Query: 124 ETVFAIIDHYWLWWLASAWTGAMLYFYYSVCRANGNTLLPGTLMMVTSVLNLILDPIFIF 183
                +   Y    + +     +     ++ R+ G+     T+ +  + +  +LDPI IF
Sbjct: 135 GETARLAHRYLSVTVHTLPLLGIGMATSALLRSVGDARRSMTVTLAGAFVTAVLDPILIF 194

Query: 184 TFDLGIDGAAIATIIAFGVGIAIVAPKVAQRQWTSYQWQDLNISQSLTALGHIMGPAMLS 243
            F LG+DGAAI+ +++     A+    V  +      +Q   +     ALG + GPA+L+
Sbjct: 195 GFGLGLDGAAISAVVSRTALAALGLHGVLVKHRMLGPFQASRLGADARALGSVAGPAVLT 254

Query: 244 QLLPPLSSMFATKLLASFGTAAVAAWALGSRFEFFALVAVLAMTMSLPPMIGRMLGAKEI 303
            L  P+ + F T  +A FG +AVA  A   R    A   V A++ ++ P++ + LGA + 
Sbjct: 255 NLATPVGAAFVTHAVAQFGPSAVAGAATIDRLTPVAFGLVYALSGAVGPILAQNLGAGQY 314

Query: 304 THIRQLVRIACQFVLGFQLLIALVTYVFATPLAELMTSETEVSQILNLHLVIVPISLGAL 363
             +++ +R +  F++    +  L+  +    L    ++E + +++++L    +  S    
Sbjct: 315 RRVQEGLRASLLFMVASVAVAWLLLALGQGLLVRAFSAEGQAAELISLFCSWLAASFFFA 374

Query: 364 GICMLMVSVANALGKSYVALTISALRLFAFYLPCLWLGAHFYGIEGLFIGALVGNIIAGW 423
           G   +  +  N LG   ++   +  R     +P  W G+H YG  G+ IG  VG+ I G 
Sbjct: 375 GGLFVANASFNNLGHPLLSTGFNWGRATLGTIPFAWWGSH-YGAAGVLIGQAVGSSIFGL 433

Query: 424 AA 425
            A
Sbjct: 434 LA 435